Cloning and Expression Analysis of PtFATB Gene Encoding the Acyl-acyl Carrier Protein Thioesterase in Populus tomentosa Carr  

毛白杨乙酰-乙酰载体蛋白硫脂酶基因(PtFATB)的克隆与表达分析(英文)

作　　者：周洲[1] 张德强[1] 卢孟柱[1] 

机构地区：[1]中国林业科学研究院林业研究所国家林业局林木培育重点实验室,北京100091

出　　处：《Journal of Genetics and Genomics》2007年第3期267-274,共8页遗传学报（英文版）

基　　金：This work was supported by project "Regulation of Composition and Saturation of Fatty Acid in Trees by Genetic Engineering", Introduction of Foreign Advanced Agricultural Science and Technology into China (No. 2005-4-52).

摘　　要：Acyl-ACP thioesterases （FATs） terminates the fatty acid synthesis and allow the transport of fatty acids out of the plastids, which are the important determinants of cellular metabolism. FATB is a member of FAT enzymes that has been described previously in most of the plants. In silico cloning is a new method that utilizes the bioinformatics on the complete genome and available EST database. In this study, a full-length cDNA clone of PtFATB gene was isolated from Populus tomentosa using this approach. It is 1,450 bp in length and the open reading frame encodes a peptide of 421 amino acids. The predicted amino acid sequence shows significant homology with those from other plant species, which contain typical domains owned by FATB proteins. The transcripts of PtFATB were abundant in leaves, and less in roots detected by using semiquantitative RT-PCR. When the shoots were subjected to the stress treatments （cold, dry, NaC1） and ABA （Abscisic acid）, the expression of PtFATB was only slightly reduced under the treatment of low temperature. This suggests that the expression of PtFATB is in a constitutive fashion. This study provides the basis not only for the identification and characterization of this gene but also for the improvement of cold tolerance by controlling the expression of the PtFATB gene in trees in near future.植物脂肪酸合成的主要部位是叶绿体,叶绿体向外运输脂肪酸的种类和数量受到乙酰-乙酰载体蛋白硫脂酶(FATB)控制。FATB基因在植物生长过程起着非常关键的作用。本研究以毛白杨为材料,将生物信息学知识和分子生物学手段相结合,首先利用现有的杨树基因组EST序列库资源,通过同源序列搜索,经过多次拼接合并获得了理论的杨树脂肪酸去饱和酶基因PtFATB序列全长,利用RT-PCR手段成功克隆得到了毛白杨FATB基因全长编码序列cDNA,该cDNA全长1,450bp,包括起始密码子ATG和144bp的5′末端非编码区,终止密码子TGA和40bp的3′末端非编码区,开放阅读框编码421个氨基酸。通过RT-PCR半定量研究了PtFATB在叶片组织中的表达量最高,茎、根中的表达量依次降低。在低温、干旱、NaCl、ABA四种条件下诱导生长24h,只有在低温的条件下发现PtFATB表达量略微降低,其他几种情况未有变化,该结果表明PtFATB呈组成型表达。上述结果为植物脂肪酸的基因工程提供了基础。

关 键 词：Populus tomentosa Carr. Acyl-acyl carrier protein thioesterase （PtFATB） in silico and molecular cloning RT-PCR expression analysis 

分 类 号：Q943.2[生物学—植物学]