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作 者:赵广录[1] 冯铁建[1] 王晓辉[1] 赵锦[1] 石向东[1] 张燕[1] 甘永霞[1] 罗贤如[1]
机构地区:[1]深圳市疾病预防控制中心艾滋病防制科,518020
出 处:《中华流行病学杂志》2009年第11期1131-1134,共4页Chinese Journal of Epidemiology
摘 要:目的了解HIV-1毒株亚型在深圳地区吸毒人群中的流行情况,并分析其流行趋势及进化规律。方法收集1996—2008年深圳地区吸毒人群HIV确认阳性样本166例,应用巢式聚合酶链反应(nPCR)技术,对样本膜蛋白基因(env)进行扩增,并对其基因区核苷酸序列进行测定和分析。结果166份样本中共存在CRF01_AE、CRF07_BC、CRF08_BC3种重组毒株以及B’、C、A13种亚型;其在所有分析样本中的比例分别为65.06%(108/166)、19.88%(33/166)、6.02%(10/166)、7.23%(12/166)、0.60%(1/166)和1.20%(2/166);系统进化分析发现,不同时间段HIV-1各亚型出现较明显的汇聚现象;3个不同时间段所流行的CRF01_AE、CRF07_BC亚型组内及与标准参考株间的基因离散率有较为显著性的增大趋势。结论深圳地区吸毒人群HIV-1流行毒株以CRF01_AE重组亚型为主,其次是CRF07_BC重组亚型,也存在CRF08_BC、B’、C、A1亚型,并且各亚型在流行过程中已发生较大变异。Objective To study the prevalent status of human immunodeficiency virus-1 (HIV-1) subtypes in IDU (injecting drug users) population in Shenzhen and to study their source of infection in order to predict the epidemic trend and evolution. Methods 166 HIV-1 positive plasma from the IDUs was collected from 1996 to 2008. HIV-1 env genes were amplified by nested-PCR from RNA. The C2-V3 regions (450 bp) of HIV-1 env were sequenced for analyses. Phylogenetic analyses were performed on the nucleotide sequence data. Results Among 166 samples, there were 6 HIV-1 strains including CRF01_AE, CRF08_BC, CRF07_BC 3 circulating recombinant forms (CRFs) and B' ,C, A13 subtypes. Data from the genotype analyses showed that 65,06% (108/166) were CRF01_AE, 19.88% (33/166) were CRF07_BC, 6.02% (10/166) were CRF08_BC, 7.23% (9/166) were subtype B ', 0.60% (1/166) were subtype C and 1.20% (2/166) were subtype A1. Phylogenetic tree analysis showed that some of HIV-1 clusters defined in CRF01 AE, CRF07_BC and subtype B' in different time groups. Significant increase of gene distance in CRF01_AE and CRF07_BC strains in the three different periods. Conclusion CRF01_AE and CRF07_BC were the major epidemic CRF strains among the IDU population in Shenzhen while the subtype B', C, A1 and CRF08_BC were also circulating in IDU population in this region. The variation of all different subtypes was increasing through these years.
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