黄土高原地区大豆根瘤菌的遗传多样性和系统发育  

Genetic diversity and phylogeny of soybean rhizobia isolated from the regions of Loess Plateau in China

作　　者：张红侠[1] 冯瑞华[1] 李俊[1] 关大伟[1] 曹凤明[1] 

机构地区：[1]中国农业科学院农业资源与农业区划研究所,北京100081

出　　处：《微生物学报》2010年第11期1466-1473,共8页Acta Microbiologica Sinica

基　　金：现代农业产业技术体系建设专项资助项目(nycytx-004);中央级公益性科研院所科研业务费专项资助项目(2010-34)~~

摘　　要：【目的】研究黄土高原地区大豆根瘤菌的遗传多样性和系统发育。【方法】采用BOX-PCR、16S rDNAPCR-RFLP、16S-23S IGS PCR-RFLP和16S rRNA基因序列分析方法对分离自我国黄土高原地区4个省的15个地区的130株大豆根瘤菌及部分参比菌株进行了遗传多样性和系统发育分析。【结果】BOX-PCR反映的菌株多样性最丰富,形成的遗传群最多,16S rDNA PCR-RFLP方法在属、种水平上聚群较好,16S-23S IGSPCR RFLP反映的多样性介于BOX-PCR和16S rDNA PCR-RFLP之间,能够较好地反映出属、种和亲缘关系很近的菌株间的差异,3种方法聚类分析结果基本一致,可将所有供试菌株分为两大类群,中华根瘤菌属(Sinorhizobium)和慢生根瘤菌属(Bradyrhizobium)。从系统发育来看,供试的快生大豆根瘤菌为费氏中华根瘤菌(Sinorhizobium fredii),慢生大豆根瘤菌为日本慢生大豆根瘤菌(Bradyrhizobium japonicum)和辽宁慢生根瘤菌(Bradyrhizobium liaoningense)。【结论】我国黄土高原地区大豆根瘤菌具有较丰富的遗传多样性,S.fredii优势种,慢生大豆根瘤菌仅占10%,同时,分离到2株B.liaoningense。[Objective]We investigated the genetic diversity and phylogeny of soybean rhizobia isolated from the regions of Loess Plateau in China. [Methods]We analyzed 130 soybean rhizobia isolated from 15 regions in 4 provinces of Loess Plateau through BOX-PCR,16S rDNA PCR-RFLP,16S-23S IGS PCR-RFLP and 16S rRNA gene sequencing. [Results]BOX-PCR,16S rDNA PCR-RFLP and 16S-23S IGS PCR-RFLP were in good agreement with the results which showed that all strains tested ascribed to two groups：the genus of Sinorhizobium and Bradyrhizobium phylogenetically. The analysis of 16S rRNA gene of 5 representative strains indicated that they were related to type strains S. fredii,B. japonicum and B. liaoningense,homology coefficient with type strains was 100% respectively. [Conclusion]Soybean rhizobia isolated from the regions of Loess Plateau in China showed rich genetic diversity. S. fredii was the dominant species. Bradyrhizobium accounted for 10% of the strains tested only,of which,two strains were B. liaoningense.

关 键 词：大豆根瘤菌 BOX-PCR 16S RDNA PCR-RFLP 16S-23S RDNA IGS PCR-RFLP 遗传多样性 系统发育 

分 类 号：S154.3[农业科学—土壤学]