甘蔗近缘属种23S-4.5S-5S rDNA内转录间隔区序列分析  被引量:1

An assessment of 23S-4.5S-5S rDNA ITS in sugarcane related genera and species

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作  者:吴杨[1] 周会[2] 李杨瑞[2] 

机构地区:[1]福建农业职业技术学院生物技术系,福州350007 [2]中国农业科学院甘蔗研究中心/农业部广西甘蔗生物技术与遗传改良重点实验室/广西农业科学院甘蔗研究所/广西甘蔗遗传改良重点实验室,南宁530007

出  处:《南方农业学报》2013年第2期185-190,共6页Journal of Southern Agriculture

基  金:广西自然科学基金项目(0991183;2011GXNSFF018002);现代农业产业技术体系项目(CARS-20-3);广西农业科学院基金项目(G2009004;2007005)

摘  要:【目的】探讨叶绿体23S-4.5S-5S rDNA内转录间隔区序列在甘蔗近缘属种系统进化中的应用,为深入研究甘蔗近缘属种系统进化提供参考。【方法】以14个甘蔗近缘属种材料为研究对象,测序分析其23S-4.5S-5S rDNA内转录间隔区序列,并应用BLAST分析其在禾本科中的变异情况。【结果】23S-4.5S-5S rDNA内转录间隔区序列在14个甘蔗近缘属种材料间的同源性为100%,属于高度保守区域,但在禾本科各亚科间表现出一定的变异,且在各亚科中都存在其特异的变异位点。【结论】23S-4.5S-5S rDNA内转录间隔区序列在甘蔗近缘属种间属于高度保守的区域,不适合用于甘蔗近缘属种间系统进化的分析,但可为禾本科亚科系统进化的分析提供有用的信息。[Objective ]The application of chloroplast 23S-4.5S-5S rDNA ITS to sugarcane related genera and species was studied to provide references for further research on phyletic evolution of sugarcane related genera and species. [Method]After sequencing the 23S-4.5S-5S rDNA ITS region of 14 accessions of sugarcane related genera and species, its variable sites among accessions in Poaceae were analyzed by BLAST program. [Result]The 23S-4.5S-5S rDNA ITS re- gions, which belonged to highly conservative regions, showed 100% of homology among 14 accessions of sugarcane related genera and species, but still presented variable sites in sub-family level of Poaccae, and all sub-family had its special variable sites. [Conclusion]Because the 23S-4.5S-5S rDNA ITS region was highly conservative, it was unsuitable for phy- logenetic study of sugarcane related genera and species, but it could provide some useful information for phylogenetic study in sub-family level of Poaceae.

关 键 词:甘蔗近缘属种 23S-4 5S-5S RDNA 内转录间隔区序列 变异 

分 类 号:S566.1[农业科学—作物学]

 

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