Analysis of MIKC^C-Type MADS-Box Gene Family in Gossypium hirsutum  

作　　者：JIANG Su-cheng PANG Chao-you SONG Mei-zhen WEI Heng-ling FAN Shu-li YU Shu-xun 

机构地区：[1]State Key Laboratory of Cotton Biology/Cotton Research Institute,Chinese Academy of Agricultural Sciences

出　　处：《Journal of Integrative Agriculture》2014年第6期1239-1249,共11页农业科学学报（英文版）

基　　金：supported by the National High-Tech R&D Program of China (2011AA10A102);the Earmarked Fund for China Agriculture Research System (CARS-18)

摘　　要：MIKCC-type MADS-box genes encode transcription factors that are involved in plant developmental control and signal transduction. Few Gossypium hirsutum MADS-box genes have been reported thus far. Recently, the genome of Gossypium raimondii, considering the contributor of the D subgenome to G. hirsutum, was sequenced and provided a valuable resource to identify and analyze multiple MADS-box genes in G. hirsutum. Here we comprehensively analyzed 53 MIKCC-type MADS-box genes, including 34 newly cloned genes. Phylogenetic analysis of these genes with those from Arabidopsis and grapevine showed that the FLC and AGL12 subfamilies were absent in G. hirsutum. Proteins within a gene subfamily tended to share conserved motifs, and large differences occurred among subfamilies. Expression analysis in multiple tissues and lforal organs implied differing roles for the subfamilies in G. hirsutum. At nine loci, two or three genes co-occurred, indicating that they came from different subgenomes; these groups had similar expression patterns. The identiifcation of MIKCC-type MADS-box genes in G. hirsutum provides a valuable resource for further research into lfowering time, lfower development and ovule development in this important crop plant.MIKCC-type MADS-box genes encode transcription factors that are involved in plant developmental control and signal transduction. Few Gossypium hirsutum MADS-box genes have been reported thus far. Recently, the genome of Gossypium raimondii, considering the contributor of the D subgenome to G. hirsutum, was sequenced and provided a valuable resource to identify and analyze multiple MADS-box genes in G. hirsutum. Here we comprehensively analyzed 53 MIKCC-type MADS-box genes, including 34 newly cloned genes. Phylogenetic analysis of these genes with those from Arabidopsis and grapevine showed that the FLC and AGL12 subfamilies were absent in G. hirsutum. Proteins within a gene subfamily tended to share conserved motifs, and large differences occurred among subfamilies. Expression analysis in multiple tissues and lforal organs implied differing roles for the subfamilies in G. hirsutum. At nine loci, two or three genes co-occurred, indicating that they came from different subgenomes; these groups had similar expression patterns. The identiifcation of MIKCC-type MADS-box genes in G. hirsutum provides a valuable resource for further research into lfowering time, lfower development and ovule development in this important crop plant.

关 键 词：transcription factor MIKCC-type MADS-BOX COTTON 

分 类 号：S562[农业科学—作物学]