Transcriptomic and proteomic analyses on the supercooling ability and mining of antifreeze proteins of the Chinese white wax scale insect  

作　　者：Shu-Hui Yu Pu Yang Tao Sun Qian Qi Xue-Qing Wang Xiao-Ming Chen Ying Feng Bo-Wen Liu 

机构地区：[1]Research Institute of Resources Insects, Chinese Academy of Forestry, Key Laboratory of Cultivating and Utilization of Resources Insectsof State Forestry Administration, Kunming, China

出　　处：《Insect Science》2016年第3期430-437,共8页昆虫科学（英文版）

基　　金：Acknowledgments This work was financially supported through a grant from the Special Fund for Forestry Research in the Public Interest （201304808, 201504302, 201204602）, Applied Basic Research Foundation of Yunnan Province （Grant No. 2013FA052, 2010ZC235）, National Natural Science Foundation of China （Grant No. 31572337, 31000983）, National High Technology Research and Development Program （＂863＂ Program） of China （2014AA021801）, National Nonprofit Institute Research Grant of RIRI-CAF （Grant No. riricaf200904M-3, riricaf2011006M）.

摘　　要：The Chinese white wax scale insect, Ericerus pela, can survive at extremely low temperatures, and some overwintering individuals exhibit supercooling at tempera- tures below -30℃. To investigate the deep supercooling ability ofE. pela, transcriptomic and proteomic analyses were performed to delineate the major gene and protein families responsible for the deep supercooling ability of overwintering females. Gene Ontology （GO） classification and Kyoto Encyclopedia of Genes and Genomes （KEGG） analysis indicated that genes involved in the mitogen-activated protein kinase, calcium, and PI3K-Akt signaling pathways and pathways associated with the biosynthesis of soluble sugars, sugar alcohols and free amino acids were dominant. Proteins responsible for low-temperature stress, such as cold acclimation proteins, glycerol biosynthesis-related enzymes and heat shock proteins （HSPs） were identified. However, no antifreeze proteins （AFPs） were identified through sequence similarity search methods. A random forest approach identified 388 putative AFPs in the proteome. The AFP gene ep-afp was expressed in Escherichia coli, and the expressed protein exhibited a thermal hysteresis activity of 0.97℃, suggesting its potential role in the deep supercooling ability ofE. pela.The Chinese white wax scale insect, Ericerus pela, can survive at extremely low temperatures, and some overwintering individuals exhibit supercooling at tempera- tures below -30℃. To investigate the deep supercooling ability ofE. pela, transcriptomic and proteomic analyses were performed to delineate the major gene and protein families responsible for the deep supercooling ability of overwintering females. Gene Ontology （GO） classification and Kyoto Encyclopedia of Genes and Genomes （KEGG） analysis indicated that genes involved in the mitogen-activated protein kinase, calcium, and PI3K-Akt signaling pathways and pathways associated with the biosynthesis of soluble sugars, sugar alcohols and free amino acids were dominant. Proteins responsible for low-temperature stress, such as cold acclimation proteins, glycerol biosynthesis-related enzymes and heat shock proteins （HSPs） were identified. However, no antifreeze proteins （AFPs） were identified through sequence similarity search methods. A random forest approach identified 388 putative AFPs in the proteome. The AFP gene ep-afp was expressed in Escherichia coli, and the expressed protein exhibited a thermal hysteresis activity of 0.97℃, suggesting its potential role in the deep supercooling ability ofE. pela.

关 键 词：antifreeze protein Chinese white wax scale insect proteome  supercoiling thermal hysteresis activity transcriptome 

分 类 号：Q51[生物学—生物化学] O552.6[理学—热学与物质分子运动论]