Molecular characterization of a peanut variety and its derivatives based on SSR and COP analysis  

Molecular characterization of a peanut variety and its deriva-tives based on SSR and COP analysis

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作  者:Xiaoping REN Huifang JIANG Zhongyuan YUAN Yuning CHEN Xiaojing ZHOU Li HUANG Jiaquan HUANG Yong LEI Liying YAN Boshou LIAO 

机构地区:[1]Oil Crop Research Institute of the Chinese Academy of Agricultural Sciences,Key Laboratory of Biology and Genetic Improvement of Oil Crops,Ministry of Agriculture

出  处:《Oil Crop Science》2016年第2期10-19,共10页中国油料作物学报(英文版)

基  金:This work was supported by a grant from the Major State Basic Research Development Program of China (973 Program)(No.2011CB109304 ); the National Natural Science Foundation of China (No. 30571132);National Science & Technology Pillar Pro-gram (2006BAD13B05- 2); Plant Germplasm Re-sources Sharing Platform (2005DKA21002 - 13); Di-rector Foundation of the Institute Oil Crop Research, CAAS(1610172011004).

摘  要:Despite the economic importance of the peanut, no studies have been carried out to deter-mine the correlation between genetic distances based on molecular markers and on coefficient of parentage (COP) data. In this study, simple sequence repeat (SSR) and pedigree data were used to assess the ge-netic distance between the Fuhuasheng variety and its derivative cultivars. A total of 39 SSR polymor-phism primers were used, and 151 bands were obtained, with an average of 2. 04 bands in each primer. The genetic SSR - based distance (GD) values ranged from 0. 02 to 0. 81, while the COP - based GD ranged from 0. 25 to 0. 98. Certain Fuhuasheng loci displayed higher transmission rates. These loci or nearby chromosomal regions might be associated with desirable traits in Fuhuasheng variety, thus being frequently selected in breeding programs. Therefore, it can be suggested that COP analysis should be the preferred method for estimating genetic diversity invarieties with available complete pedigree information and parents. In this case, marker analysis would provide the best estimations.

关 键 词:peanut (Arachis hypogaea L.  coefficient of parentage (COP) simple sequence re-peat (SSR) genetic distance (GD) 

分 类 号:S565.2[农业科学—作物学]

 

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