水稻SOD基因家族的全基因组分析及逆境胁迫下表达研究  

Genome-wide Analysis of Rice SOD Gene Family and Expression Research under Stress

作　　者：刘家林 欧阳林娟[1,2,3] 曾嘉丽 傅军如 贺浩华[1,2,3] 朱昌兰 彭小松[1,2,3] 贺晓鹏 陈小荣[1,2,3] 边建民 徐杰[1,2,3] 孙晓棠 周大虎[1,2,3] 胡丽芳 Liu Jialin;Ouyang Linjuan;Zeng Jiali;Fu Junru;He Haohua;Zhu Changlan;Peng Xiaosong;He Xiaopeng;Chen Xiaorong;Bian Jianmin;Xu Jie;Sun Xiaotang;Zhou Dahu;Hu Lifang(Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Jiangxi Agricultural University, Nanchang, 330045;Re-earth Center of Super Rice Engineering and Technology, Jiangxi Province, Nanchang, 330045;Collaboration Center for Double Cropping Rice Modernization Production, Nanchang, 330045)

机构地区：[1]江西农业大学作物生理生态与遗传育种教育部重点实验室,南昌330045 [2]江西省超级稻工程技术研究中心,南昌330045 [3]双季稻现代化生产协同中心,南昌330045

出　　处：《分子植物育种》2018年第9期2753-2760,共8页Molecular Plant Breeding

基　　金：国家自然科学基金项目(31160062;31660385);江西省教育厅科学基金项目(GJJ12242);江西农业大学研究生创新项目(NDYC2016-S002);江西省自然科学基金项目(20122BAB214017)共同资助

摘　　要：超氧化物歧化酶(SOD)是植物体内活性氧清除系统中的关键酶。为进一步研究水稻SOD基因家族的特点,利用生物信息学的方法,在水稻全基因组水平上对SOD基因家族进行了基因结构、染色体定位及进化树等方面的分析。结果表明,水稻基因组中共有9个OsSOD基因,包括6个Cu/Zn-SOD、2个Fe-SOD和1个Mn-SOD,可分为2个亚家族。9个OsSOD基因含有5~9个内含子不等,分布在6条染色体上。荧光定量qRTPCR分析表明,在NaCl、干旱、ABA和低温等4种逆境条件下,8个OsSOD基因的表达量会受其中三种胁迫而发生变化。Superoxide dismutase（SOD） is the key scavenging enzyme of reactive oxygen species system in plants.To further study the characteristics of rice SOD gene family, the gene structure, phylogenetic relationship tree and chromosome localization were analyzed at the genome-wide level using bioinformatics methods. The results showed that, there were 9 rice OsSOD genes including 6 Cu/Zn-SOD, 2 Fe-SOD and 1 Mn-SOD in rice genome,which could be divided into 2 subfamilies. The 9 OsSOD genes contained 5-9 introns and distributed on 6 different chromosomes. Quantitative qRT-PCR analysis demonstrated that, under 4 stresses-NaCl, drought, ABA and low temperature, the expression of 8 OsSOD genes was responsed to 3 kind of stresses.

关 键 词：水稻 超氧化物歧化酶 生物信息学 表达 

分 类 号：S511[农业科学—作物学]