PK-15细胞中与CSFV感染相关的microRNAs筛选及miR-214的功能研究  

Screen of MicroRNAs in Classical Swine Fever Virus-Infected PK-15 Cells and the Regulation of Virus Replication by miR-214

作　　者：邓少锋 叶佐东 范双旗 陈金顶[1] 张静远[1] 朱梦娇 赵明秋[1] DENG ShaoFeng;YE ZuoDong;FAN ShuangQi;CHEN JinDing;ZHANG JingYuan;ZHU MengJiao;ZHAO MingQiu(College of Veterinary Medicine,South China Agricultural University,Guangzhou 510642)

机构地区：[1]华南农业大学兽医学院,广州510642

出　　处：《中国农业科学》2018年第21期4157-4168,共12页Scientia Agricultura Sinica

基　　金：国家重点研发计划(2017YFD0501104;2017YFD0500600);广州市科技计划项目(201803020005);国家自然科学基金(U1405216;31472200;31672590)

摘　　要：【目的】利用制作的猪的miRNA表达谱芯片筛选猪瘟病毒(classical swine fever virus,CSFV)感染PK-15细胞后表达有差异的miRNA,并进一步探讨其中表达差异较明显的miRNA的作用和功能,从miRNA的角度探究CSFV的致病机制,为猪瘟(classical swine fever,CSF)的防控提供新依据。【方法】为了研究CSFV感染PK-15细胞后miRNA表达的变化情况,根据miRBase version 19.0数据库中326条猪的miRNA合成探针,采用原位合成技术制作表达谱芯片,筛选得到CSFV感染PK-15细胞后表达有差异的miRNA。挑选CSFV感染PK-15细胞后表达差异最明显的miR-214作为进一步研究对象,研究miR-214在CSFV感染过程中的功能和作用。CSFV感染PK-15细胞后,用荧光定量PCR检测miR-214的mRNA表达水平。为了进一步研究miR-214对CSFV感染的影响,合成miR-214模拟物及抑制物,并分别转染PK-15细胞,转染后24 h感染CSFV,感染后48h用荧光定量PCR检测CSFV的基因拷贝数,用间接免疫荧光方法检测CSFV的病毒滴度。为了进一步探究miR-214参与调控CSFV复制的机制,通过生物信息学软件预测miR-214参与调控CSFV复制的靶蛋白,并用荧光素酶报告基因系统进一步确证miR-214能够靶向作用于凋亡通路中重要分子TNFR1相关的死亡区域蛋白(TNF Receptor-Associated Death Domain,TRADD),因此猜测miR-214通过影响靶蛋白TRADD的表达水平从而影响PK-15细胞凋亡,将miR-214模拟物及抑制物分别转染PK-15细胞,转染后24 h感染CSFV,同步设立不感染CSFV的细胞对照,感染后48 h用荧光定量PCR和Western blot分别检测TRADD的mRNA和蛋白表达量的变化,同时用流式细胞术检测miR-214对CSFV感染的PK-15细胞凋亡的影响。【结果】CSFV感染PK-15细胞后,通过表达谱芯片技术筛选得到69条表达有差异的miRNA,其中miR-214表达量上调且差异最明显。qRT-PCR结果显示,CSFV感染PK-15细胞后miR-214的mRNA表达量上调,验证了表达谱芯片的结果。将miR-214模拟物转�【Objective】 In this study, differential expression of miRNAs in CSFV-infected PK-15 cells were determined by miRNA expression array, and further explore the function of miRNAs in the pathogenic of Classical swine fever virus（CSFV）, and provide some new basis for the prevention and control of Classical swine fever（CSF）.【Method】 In order to investigate the changes of the miRNAs expression in CSFV-infected PK-15 cells, we synthesized probes of 326 miRNAs of pig according to the miRBase database version 19.0, and screening of differential expression of miRNAs in CSFV-infected PK-15 cells using miRNA expression array. Then, miR-214, the most obvious difference in expression of CSFV-infected PK-15 cells, was selected as the further study object to investigate the function of miR-214 in the infection process of CSFV. We detected mRNA expression of miR-214 in CSFV-infected PK-15 cells using qRT-PCR. In order to further study the effect of miR-214 of CSFV infection, we synthesized miR-214 analog and inhibitor and transfected into PK-15 cells respectively, follow with CSFV infection at 24 h post-transfection, and then detected CSFV titers and quantity of CSFV genomic copies. In order to further explore the mechanism of miR-214 participate in the regulation of CSFV replication, we predicted the target protein of miR-214 using bioinformatics software and confirmed it by luciferase reporter gene system. Given TRADD can specific interacts with TNFR1 intracellular dead zones and participate in the programmed cell death, we assume that miR-214 influencing apoptosis of PK 15 cells by influencing expression level of target protein TRADD. PK 15 cells transfected with miR-214 and inhibitor respectively, follow with CSFV infection at 24 h post-transfection. At 48 h post-infection, the expression levels of TRADD were detected, and the effect of miR-214 on the apoptosis of CSFV-infected PK-15 cells was detected by flow cytometry. 【Result】 69 miRNAs with different expressions were screened by miRNA expression array i

关 键 词：猪瘟病毒 MIRNA 复制 TRADD 凋亡 

分 类 号：S852.651[农业科学—基础兽医学]