狗枣猕猴桃AkKCS蛋白的生物信息学分析  

Bioinformatics Analysis of AkKCS from Actinidia kolomikta

作　　者：孙晶晶 陈鑫[1] 李然红[1] 王立凤[1] SUN Jingjing;CHEN Xin;LI Ranhong;WANG Lifeng(Mudanjiang Normal University,Mudanjiang,Heilongjiang 157012,China)

机构地区：[1]牡丹江师范学院,黑龙江牡丹江157012

出　　处：《贵州农业科学》2020年第12期103-105,共3页Guizhou Agricultural Sciences

基　　金：牡丹江师范学院大学生科技创新项目(201910233007);牡丹江师范学院科研项目(YB2019005);牡丹江师范学院校级科研团队建设项目(1355TD004)。

摘　　要：为深入研究狗枣猕猴桃AkKCS蛋白功能,利用生物信息学方法,对其蛋白质的理化性质、亲水/疏水性和功能结构域进行分析。结果表明:狗枣猕猴桃AkKCS蛋白cDNA全长为1693 bp,共编码496个氨基酸,为亲水性、不稳定蛋白质,具有KCS超家族的保守结构域(ID:PLN03212),AkKCS氨基酸序列与中华猕猴桃原变种亲缘关系较近,与烟草等12种其他植物亲缘关系较远。In order to deeply study the protein function of AkKCS in Actinidia kolomikta,the physiochemical property,hydrophilicity/hydrophobicity and functional domains of its protein are analyzed by using bioinformatics method.Result:AkKCS protein cDNA of A.kolomikta has a full length of 1693 bp and encodes 496 amino acids in total.It is a hydrophilic and unstable protein with a conserved domain of KCS superfamily(ID:PLN03212).AkKCS amino acid sequence is closely related with Actinidia chinensis var.chinensis,and is far from 12 other plants such as Nicotiana tabacum.

关 键 词：狗枣猕猴桃 AkKCS 生物信息学 

分 类 号：S663.4[农业科学—果树学]