Eyes of diff ering colors in Alvinocaris longirostris from deep-sea chemosynthetic ecosystems: genetic and molecular evidence of its formation mechanism  

作　　者：Qian XIN Min HUI Chaolun LI Zhongli SHA 

机构地区：[1]Institute of Oceanology,Chinese Academy of Sciences,Qingdao 266071,China [2]Center for Ocean Mega-Science,Chinese Academy of Sciences,Qingdao 266071,China [3]Laboratory for Marine Biology and Biotechnology,Qingdao National Laboratory for Marine Science and Technology,Qingdao 266237,China [4]University of Chinese Academy of Sciences,Beijing 100049,China

出　　处：《Journal of Oceanology and Limnology》2021年第1期282-296,共15页海洋湖沼学报（英文）

基　　金：Supported by the National Key R&D Program of China(No.2018YFC0310802);the National Natural Science Foundation of China(No.31872215);the Senior User Project of R/V Kexue(No.KEXUE2019GZ02);the Strategic Priority Research Program of the Chinese Academy of Sciences(CAS)(No.XDA22050302);the Key Research Program of Frontier Sciences,CAS(No.QYZDB-SSW-DQC036)。

摘　　要：Coloration is an important phenotypic trait for multiple adaptive functions.It is interesting to fi nd white-eye(AW)and orange-eye(AO)phenotypes in the shrimp Alvinocaris longirostris inhabiting the deep-sea cold seep and hydrothermal vent areas of the northwestern Pacifi c.By comparative transcriptome analyses,1491 diff erentially expressed genes(DEGs)were identified between AW and AO.Among them,many DEGs were associated with immunity,antioxidation,and detoxifi cation.Two signifi cant enzyme encoding genes,xanthine dehydrogenase,and tryptophan oxidase involved in pigment biosynthesis pathways were up-regulated in AW and AO,respectively,which might be related to the diff erences of white and orange eye phenotypes.Moreover,single nucleotide polymorphism(SNP)calling detected that genotypes of 28 SNP distributing in 14 unigenes were completely diff erent between AW and AO.Particularly,there were three and two non-synonymous mutations in immune genes crustin Pm5 and antimicrobial peptide,respectively.Results indicate that the diff erence in eye color is probably resulted from immune response to variable micro-environmental stressors encountered in the dispersal process of the shrimps,such as symbiotic microbes,pathogens,and toxic substances,and might be genetically fi xed at last.The suggested pathway preliminarily explained the formation mechanism of diff erent eye phenotypes in Alvinocaridid shrimps,providing a basis for further study on adaptive evolution of eyes in deep-sea chemosynthetic faunas.

关 键 词：alvinocaridid shrimps cold seep and hydrothermal vent diff erentially expressed genes eye color single nucleotide polymorphism(SNP)mutation transcriptome 

分 类 号：S917.4[农业科学—水产科学]