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作 者:Erin A.McKENNEY Melissa ASHWELL Joanna E.LAMBERT Vivek FELLNER
机构地区:[1]Department of Animal Sciences,North Carolina State University,Raleigh,North Carolina,USA [2]Department of Anthropology,The University of Texas at San Antonio,Texas,USA
出 处:《Integrative Zoology》2014年第5期557-569,共13页整合动物学(英文版)
摘 要:Microbial populations in the gastrointestinal tract contribute to host health and nutrition.Although gut microbial ecology is well studied in livestock and domestic animals,little is known of the endogenous populations inhabiting primates or carnivora.We characterized microbial populations in fecal cultures from gorillas(Gorilla gorilla gorilla),common chimpanzees(Pan troglodytes),Hamadryas baboons(Papio hamadryas)and binturongs(Arctictis binturong)to compare the microbiomes associated with different gastrointestinal morphologies and different omnivorous feeding strategies.Each species was fed a distinct standardized diet for 2 weeks prior to fecal collection.All diets were formulated to reflect the species’feeding strategies in situ.Fresh fecal samples were pooled within species and used to inoculate in vitro batch cultures.Acetate,propionate,butyrate and valerate were measured after 24 h of incubation.Eubacterial DNA was extracted from individual fecal samples,pooled,and the cpn60 gene region was amplified and then sequenced to identify the major eubacterial constituents associated with each host species.Short chain fatty acids(P<0.001)and methane(P<0.001)were significantly different across species.Eubacterial profiles were consistent with fermentation data and suggest an increase in diversity with dietary fiber.
关 键 词:ecology FERMENTATION gastrointestinal microbiota microbial diversity
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