Notes,outline and divergence times of Basidiomycota  被引量:19

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作  者:Mao-Qiang He Rui-Lin Zhao Kevin D.Hyde Dominik Begerow Martin Kemler Andrey Yurkov Eric H.C.McKenzie Olivier Raspe Makoto Kakishima Santiago Sanchez-Ramırez Else C.Vellinga Roy Halling Viktor Papp Ivan V.Zmitrovich Bart Buyck Damien Ertz Nalin N.Wijayawardene Bao-Kai Cui Nathan Schoutteten Xin-Zhan Liu Tai-Hui Li Yi-Jian Yao Xin-Yu Zhu An-Qi Liu Guo-Jie Li Ming-Zhe Zhang Zhi-Lin Ling Bin Cao Vladimir Antonin Teun Boekhout Bianca Denise Barbosa da Silva Eske De Crop Cony Decock Balint Dima Arun Kumar Dutta Jack W.Fell Jozsef Geml Masoomeh Ghobad-Nejhad Admir J.Giachini Tatiana B.Gibertoni Sergio P.Gorjon Danny Haelewaters Shuang-Hui He Brendan P.Hodkinson Egon Horak Tamotsu Hoshino Alfredo Justo Young Woon Lim Nelson Menolli Jr Armin Mesic Jean-Marc Moncalvo Gregory M.Mueller La szlo G.Nagy RHenrik Nilsson Machiel Noordeloos Jorinde Nuytinck Takamichi Orihara Cheewangkoon Ratchadawan Mario Rajchenberg Alexandre G.S.Silva-Filho Marcelo Aloisio Sulzbacher Zdenko Tkalcec Ricardo Valenzuela Annemieke Verbeken Alfredo Vizzini Felipe Wartchow Tie-Zheng Wei Michael WeiB Chang-Lin Zhao Paul M.Kirk 

机构地区:[1]State Key Laboratory of Mycology,Institute of Microbiology,Chinese Academy of Sciences,Beijing 100101,People’s Republic of China [2]Department of Entomology and Plant Pathology,Faculty of Agriculture,Chiang Mai University,Chiang Mai 50200,Thailand [3]Center of Excellence in Fungal Research,Mae Fah Luang University,Chiang Rai 57100,Thailand [4]College of Life Sciences,University of Chinese Academy of Sciences,Huairou District,Beijing 100408,People’s Republic of China [5]Ruhr-Universitat Bochum,AG Geobotanik,ND03,UniversitatsstraBe 150,44801 Bochum,Germany [6]Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures,InhoffenstraBe 7B,38124 Brunswick,Germany [7]Manaaki Whenua-Landcare Research,Private Bag 92170,Auckland,New Zealand [8]Research Department,Meise Botanic Garden,Nieuwelaan 38,1860 Meise,Belgium [9]Service General de l'Enseignement superieur et de la Recherche scientifique,Federation Wallonie-Bruxelles,Lavallee 1,1080 Brussels,Belgium [10]University of Tsukuba,Tsukuba,Ibaraki 305-8572,Japan [11]Department of Ecology and Evolutionary Biology,University of Toronto,25 Willcocks St.,Toronto,ON M5S 3B2,Canada [12]Berkeley,USA [13]Institute of Systematic Botany,The New York Botanical Garden,Bronx,NY 10458-5126,USA [14]Department of Botany,Szent Istvan University,1518 Budapest,Hungary [15]Komarov Botanical Institute,Russian Academy of Sciences,Professor Popov st.2,Saint Petersburg,Russia 197376 [16]Institut pour Systematique Ecologie Biodiversite(ISYEB UMR 7205),Sorbonne universite,Museum National d’Histoire Naturelle CP 39,CNRS,Departement Origines et Evolution,12 Rue Buffon,75005 Paris,France [17]Institute of Microbiology,Beijing Forestry University,Beijing 100083,People’s Republic of China [18]Department of Biology,Research Group Mycology,Ghent University,K.L.Ledeganckstraat 35,9000 Ghent,Belgium [19]State Key Laboratory of Applied Microbiology Southern China,Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application,Guangdong Institute of Microbiology,G

出  处:《Fungal Diversity》2019年第6期105-367,共263页真菌多样性(英文)

基  金:National Key R&D Program of China(Project No.2018YFD0400200);the National Natural Science Foundation of China(Project IDs:31470152,31360014 and 31970010);Beijing Innovative Consortium of Agriculture Research System(Project ID:BAIC05-2019);the Thailand Research funds for grant RDG6130001 entitled"Impact of climate change on fungal diversity and biogeography in the Greater Mekong Subregion";Thailand Science Research and Innovation fund for the grant DBG6280009 entitled Macrofungi diversity research from the Lancang-Mekong Watershed and surrounding areas;Croatian Science Foundation for support under the project For FungiDNA(IP-2018-01-1736);the support provided by the Moravian Museum by the Ministry of Culture of the Czech Republic as part of its long-term conceptual development programme for research institutions[Grant Number DKRVO,Ref.MK000094862];National Natural Science Foundation of China(31270072);the Special Funds for the Young Scholars of Taxonomy of the Chinese Academy of Sciences(ZSBR-001);National Key Basic Research Special Foundation of China(2013FY110400);support from the Department of Science&Technology(DST),New Delhi,India;in the form of a DST-Inspire Faculty Fellowship(DST/INSPIRE/04/2018/001906,dated 24 July,2018);State task of the V.L.Komarov Botanical Institute of the Russian Academy of Sciences(AAAA-A19-119080990059-1 and RFBR,project 19-04-00024);the National Natural Science Foundation of China(Nos.30770013,31500013);the National Project on Scientific Ground work for Basic Science of the Ministry of Science and Technology(Nos.2012FY1116002014FY210400);the Coordenacao de Aperfeic¸oamento de Pessoal de Nivel Superior(CAPES-Brazil)for the PhD scholarships;CNPq for providing‘Produtividade em Pesquisa’(Proc.307922/2014-6 and Proc.307947/2017-3)grant;CONACYT(Project 252934)COFAA;IPN(Project SIP-20195222)the financial support provided for his researches;the Coordenacao de Aperfeic¸oamento de Pessoal de Nivel Superior(CAPES-Brazil)for the PhD scholarships;the following sources of funding for his A

摘  要:The Basidiomycota constitutes a major phylum of the kingdom Fungi and is second in species numbers to the Ascomycota.The present work provides an overview of all validly published,currently used basidiomycete genera to date in a single document.An outline of all genera of Basidiomycota is provided,which includes 1928 currently used genera names,with 1263 synonyms,which are distributed in 241 families,68 orders,18 classes and four subphyla.We provide brief notes for each accepted genus including information on classification,number of accepted species,type species,life mode,habitat,distribution,and sequence information.Furthermore,three phylogenetic analyses with combined LSU,SSU,5.8s,rpb1,rpb2,and ef1 datasets for the subphyla Agaricomycotina,Pucciniomycotina and Ustilaginomycotina are conducted,respectively.Divergence time estimates are provided to the family level with 632 species from 62 orders,168 families and 605 genera.Our study indicates that the divergence times of the subphyla in Basidiomycota are 406-430 Mya,classes are 211-383 Mya,and orders are 99-323 Mya,which are largely consistent with previous studies.In this study,all phylogenetically supported families were dated,with the families of Agaricomycotina diverging from 27-178 Mya,Pucciniomycotina from 85-222 Mya,and Ustilaginomycotina from 79-177 Mya.Divergence times as additional criterion in ranking provide additional evidence to resolve taxonomic problems in the Basidiomycota taxonomic system,and also provide a better understanding of their phylogeny and evolution.

关 键 词:Classification Molecular clock FUNGI SYSTEMATICS TAXONOMY 

分 类 号:O17[理学—数学]

 

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