High-level classification of the Fungi and a tool for evolutionary ecological analyses  

作　　者：Leho Tedersoo Santiago Sanchez-Ramırez Urmas Koljalg Mohammad Bahram Markus Doring Dmitry Schigel Tom May Martin Ryberg Kessy Abarenkov 

机构地区：[1]Natural History Museum,University of Tartu,14a Ravila,50411 Tartu,Estonia [2]Institute of Ecology and Earth Sciences,University of Tartu,14a Ravila,50411 Tartu,Estonia [3]Estonian Young Academy of Sciences,6 Kohtu,Tallinn,Estonia [4]Department of Ecology and Evolutionary Biology,University of Toronto,25 Willcocks St.,Toronto,ON M5S 3B2,Canada [5]Systematic Biology,Evolutionary Biology Centre,Uppsala University,Norbyvagen 18D,75236 Uppsala,Sweden [6]Global Biodiversity Information Facility,Copenhagen,Denmark [7]Department of Biosciences,University of Helsinki,Helsinki,Finland [8]Royal Botanic Gardens Victoria,Birdwood Ave,Melbourne,VIC 3004,Australia

出　　处：《Fungal Diversity》2018年第3期135-159,共25页真菌多样性（英文）

基　　金：LT acknowledges funding from the Estonian Science Foundation(1399PUT,IUT20-30),MOBERC and ECOLCHANGE.

摘　　要：High-throughput sequencing studies generate vast amounts of taxonomic data.Evolutionary ecological hypotheses of the recovered taxa and Species Hypotheses are difficult to test due to problems with alignments and the lack of a phylogenetic backbone.We propose an updated phylum-and class-level fungal classification accounting for monophyly and divergence time so that the main taxonomic ranks are more informative.Based on phylogenies and divergence time estimates,we adopt phylum rank to Aphelidiomycota,Basidiobolomycota,Calcarisporiellomycota,Glomeromycota,Entomophthoromycota,Entorrhizomycota,Kickxellomycota,Monoblepharomycota,Mortierellomycota and Olpidiomycota.We accept nine subkingdoms to accommodate these 18 phyla.We consider the kingdom Nucleariae(phyla Nuclearida and Fonticulida)as a sister group to the Fungi.We also introduce a perl script and a newick-formatted classification backbone for assigning Species Hypotheses into a hierarchical taxonomic framework,using this or any other classification system.We provide an example of testing evolutionary ecological hypotheses based on a global soil fungal data set.

关 键 词：51 new taxa Species Hypothesis Taxonomy of fungi Phylogenetic classification Subkingdom PHYLUM Nucleariae ASCOMYCOTA Aphelidiomycota Basidiobolomycota BASIDIOMYCOTA Blastocladiomycota Calcarisporiellomycota Chytridiomycota Entomophthoromycota Entorrhizomycota GLOMEROMYCOTA Kickxellomycota Monoblepharomycota Mortierellomycota Mucoromycota Neocallimastigomycota Olpidiomycota Rozellomycota Zoopagomycota 

分 类 号：O17[理学—数学]