A chromosome-level genome assembly of the miiuy croaker(Miichthys miiuy)using nanopore sequencing and Hi-C  

作　　者：Tianjun Xu Ye Li Weiwei Zheng Yuena Sun 

机构地区：[1]Laboratory of Fish Molecular Immunology,College of Fisheries and Life Science,Shanghai Ocean University,Shanghai,201306,China [2]Laboratory of Marine Biology and Biotechnology,Qingdao National Laboratory for Marine Science and Technology,Qingdao,266200,China [3]Key Laboratory of Exploration and Utilization of Aquatic Genetic Resources(Shanghai Ocean University),Ministry of Education,Shanghai,201306,China [4]National Pathogen Collection Center for Aquatic Animals,Shanghai Ocean University,Shanghai,201306,China

出　　处：《Aquaculture and Fisheries》2024年第2期218-225,共8页渔业学报（英文）

基　　金：supported by the National Key Research and Development Project(2018YFD0900301);the National Natural Science Foundation of China(31802325).

摘　　要：Miiuy croaker,Miichthys miiuy is an ecologically important teleost species which is widely distributed in southeast coast of China.In this study,we present a chromosomal-scale genome assembly of the miiuy croaker which is an important Sciaenidae fish and economical species.We adopted Oxford Nanopore and Hi-C sequencing techniques to achieve an assembly with high accuracy and completeness.The investigation of genome characteristic and functional features may provide insights into the study of phylogenetic diversity of miiuy croaker.This study can also be beneficial to improve molecular assisted breeding techniques.Moreover,it can be a great resource to better conduct further study of other sciaenids.

关 键 词：Miiuy croaker Chromosomal assembly Genome annotation Genome evolution PHYLOGENETIC 

分 类 号：Q95[生物学—动物学]