番茄褐色皱纹果病毒分子检测与基因组部分序列分析  

Molecular Detection and Genome Sequence Analysis of Tomato brown rugose fruit virus

作　　者：华明艳[1] 宋兰芳[1] 崔少杰[1] 孙海波[1] 金凤媚[1] HUA Mingyan;SONG Lanfang;CUI Shaojie;SUN Haibo;JIN Fengmei(Tianjin Academy of Agricultural Sciences,Tianjin 300192,China)

机构地区：[1]天津市农业科学院,天津300192

出　　处：《华北农学报》2024年第3期179-186,共8页Acta Agriculturae Boreali-Sinica

基　　金：国家重点研发项目(2023YFD1201503);天津市农业产学研用“揭榜挂帅”项目(GBGG202313);2023年农业主导产业自主创新科研项目(22023ZYCX016,2023ZYCX017);天津市宝坻区农业科技计划项目(202102,202109)。

摘　　要：为了确定张家口及银川番茄产区是否发生番茄褐色皱纹果病毒病(ToBRFV),探究番茄ToBRFV的遗传信息和演化,为番茄褐色皱纹果病毒的诊断和防治及番茄抗病毒病基因工程提供重要的科学依据,采用张家口和银川两地区疑似病果进行分子检测,并利用相关分子生物学软件对该病毒基因进行序列分析及全基因组的系统进化分析。结果表明,张家口及银川果实病毒分离物与GenBank中大部分ToBRFV分离物的基因组结构相似性在99%以上,确定两地区番茄果实病毒为番茄褐色皱纹果病毒。ToBRFV分离物的地域性很强,中国不同地区的ToBRFV病毒,与来自欧洲和亚洲的多个国家地区都有关联,张家口分离物与中国分离物(MT018320.1)亲缘关系最近,银川分离物与秘鲁分离物聚类到一起,说明银川分离物可能来自南美洲。张家口分离物与中国分离物(MT018320.1)的4个ORF氨基酸相似性最高,而银川分离物与张家口分离物相似性较低。另外,研究结果首次发现,银川分离物CP蛋白的第444位碱基由A突变成G,从而导致CP蛋白的氨基酸第131位由V(缬氨酸)突变为A(丙氨酸),CP蛋白发生了有义突变。综上所述,张家口及银川番茄产区发生了番茄褐色皱纹果病毒病,且两地区的病毒来自不同的地方。In order to determine whether Tomato brown rugose fruit virus(ToBRFV)occurs in Zhangjiakou and Yinchuan tomato producing areas,and to explore the genetic information and evolution of ToBRFV,so as to provide an important scientific basis for the diagnosis and control of ToBRFV and the genetic engineering of tomato resistance to viral diseases.Molecular detection was carried out in Zhangjiakou and Yinchuan suspected diseased fruits,and sequence analysis and genome-wide phylogenetic analysis of the virus gene were carried out by relevant molecular biology software.The results showed that the genome structure similarity between the virus isolates from Zhangjiakou and Yinchuan fruit was more than 99%similar to most of the ToBRFV isolates in GenBank,and the tomato fruit virus in the two places was determined to be ToBRFV.ToBRFV isolates were highly regional,and ToBRFV viruses from different regions of China were associated with many countries and regions from Europe and Asia,and the Zhangjiakou isolate was most closely related to the Chinese isolate(MT018320.1),and the Yinchuan isolate was clustered with the Peruvian isolate,indicating that the Yinchuan isolate may have originated from South America.The similarity of the four ORF amino acids of the Zhangjiakou isolate from China(MT018320.1)was the highest,while the similarity between the Yinchuan isolate and the Zhangjiakou isolate was low.In addition,this study found for the first time that the 444th base of the Yinchuan isolate CP protein changed from A to G,resulting in a meaningful mutation of the 131st amino acid of the CP protein from V(valine)to A(alanine).In summary,ToBRFV disease occurred in Zhangjiakou and Yinchuan tomato producing areas,and the virus came from different places in the two regions.

关 键 词：番茄 番茄褐色皱纹果病毒 分子检测 序列分析 

分 类 号：S641.2[农业科学—蔬菜学]