Plant genomic resources at National Genomics Data Center:assisting in data-driven breeding applications  

作　　者：Dongmei Tian Tianyi Xu Hailong Kang Hong Luo Yanqing Wang Meili Chen Rujiao Li Lina Ma Zhonghuang Wang Lili Hao Bixia Tang Dong Zou Jingfa Xiao Wenming Zhao Yiming Bao Zhang Zhang Shuhui Song 

机构地区：[1]National Genomics Data Center,Beijing Institute of Genomics,Chinese Academy of Sciences&China National Center for Bioinformation,Beijing 100101,China [2]CAS Key Laboratory of Genome Sciences and Information,Beijing Institute of Genomics,Chinese Academy of Sciences&China National Center for Bioinformation,Beijing 100101,China [3]University of Chinese Academy of Sciences,Beijing 100049,China

出　　处：《aBIOTECH》2024年第1期94-106,共13页生物技术通报（英文版）

基　　金：supported by Technological Innovation 2030 (2022ZD0401701);National Natural Science Foundation of China (32000475,32030021);Strategic Priority Research Program of the Chinese Academy of Sciences (XDA24040201);Youth Innovation Promotion Association of the Chinese Academy of Sciences (Y2021038).

摘　　要：Genomic data serve as an invaluable resource for unraveling the intricacies of the higher plant systems,including the constituent elements within and among species.Through various efforts in genomic data archiving,integrative analysis and value-added curation,the National Genomics Data Center(NGDC),which is a part of the China National Center for Bioinformation(CNCB),has successfully established and currently maintains a vast amount of database resources.This dedicated initiative of the NGDC facilitates a data-rich ecosystem that greatly strengthens and supports genomic research efforts.Here,we present a comprehensive overview of central repositories dedicated to archiving,presenting,and sharing plant omics data,introduce knowledgebases focused on variants or gene-based functional insights,highlight species-specific multiple omics database resources,and briefly review the online application tools.We intend that this review can be used as a guide map for plant researchers wishing to select effective data resources from the NGDC for their specific areas of study.

关 键 词：Plant-omics data Data repositories Data integration KNOWLEDGEBASE Plant genomics 

分 类 号：Q943.2[生物学—植物学]