Cloning and Bioinformatics Analysis of ZmERECTA-LIKE1 and Construction of Plant Expression Vector  

作　　者：Yihong JI Jinbao PAN Min LU Jun HAN Zhangjie NAN Qingpeng SUN 

机构地区：[1]Introduction Beijing Key Laboratory for Agricultural Application and New Technique, Plant Science and Technology College, Beijing University of Agriculture

出　　处：《Agricultural Science & Technology》2016年第3期523-525,共3页农业科学与技术（英文版）

基　　金：Supported by the Distinguished Young Scientists Project of Beijing(CIT&TCD201304096);Academic Degrees and Graduate Education Reform and Development Program of Beijing University of Agriculture(5056516002\016)

摘　　要：[Objective] This study was conducted to clone and analyze ERECTA-LIKE1 gene in Zea mays by PCR and bioinformatics methods and to construct plant expression vector p Cambia3301-zm ERECTA-LIKE1. [Method] zm ERECTA-LIKE1(zm ERL1)gene was obtained using RT-PCR, and physical-chemical properties were analyzed by bioinformatics methods, including domains,transmembrane regions, N-Glycosylation potential sites phosphorylation sites, and etc. [Result] Bioinformatics results showed that zm ERL1 gene was 2 169 bp, which encoded a protein consisting of 722 amino acids, 11 N-glycosylation potential sites and 42 kinase specific phosphorylation sites. According to CDD2.23 and TMHMM Server v. 2.0 software, there were leucine-rich repeats,a PKC domain and a transmembrane region in this protein. The theoretical p I and molecular weight of zm ERL1 encoded protein was 6.20 and 79 184.8 using Compute PI/Mw tool. Furthermore, we constructed the plant expression vector p Cambia3301-zm ERECTA-LIKE1 by subcloning zm ERL1 gene into p Cambia3301 instead of GUS. [Conclusion] The results provide a theoretical basis for the application of zm ERL1 gene in future study.[Objective] This study was conducted to clone and analyze ERECTA-LIKE1 gene in Zea mays by PCR and bioinformatics methods and to construct plant expression vector p Cambia3301-zm ERECTA-LIKE1. [Method] zm ERECTA-LIKE1（zm ERL1）gene was obtained using RT-PCR, and physical-chemical properties were analyzed by bioinformatics methods, including domains,transmembrane regions, N-Glycosylation potential sites phosphorylation sites, and etc. [Result] Bioinformatics results showed that zm ERL1 gene was 2 169 bp, which encoded a protein consisting of 722 amino acids, 11 N-glycosylation potential sites and 42 kinase specific phosphorylation sites. According to CDD2.23 and TMHMM Server v. 2.0 software, there were leucine-rich repeats,a PKC domain and a transmembrane region in this protein. The theoretical p I and molecular weight of zm ERL1 encoded protein was 6.20 and 79 184.8 using Compute PI/Mw tool. Furthermore, we constructed the plant expression vector p Cambia3301-zm ERECTA-LIKE1 by subcloning zm ERL1 gene into p Cambia3301 instead of GUS. [Conclusion] The results provide a theoretical basis for the application of zm ERL1 gene in future study.

关 键 词：Zea mays BIOINFORMATICS Plant expression vector 

分 类 号：Q943.2[生物学—植物学] Q811.4