不同治疗效果的艾滋病患者抗病毒治疗前HIV-1 gp120准种特征差异  被引量:1

Analysis of quasispecies characteristics in HIV-1 gpl20 from AIDS patients with different treatment outcomes

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作  者:欧阳雅博[1] 孔德生[2] 王彦[2] 王琛[2] 李臻鹏[2] 焦洋[2] 殷倩倩[2] 陈德喜[1] 马丽英[2] OU YANG Ya-bo KONG De-sheng WANG Yan WANG Chen LI Zhen-peng JIAO Yang YIN Qian-qian CHEN De-xi MA Li-ying(You 'an Hospital Affiliated to Capital Medical University, Beijing 100069, China)

机构地区:[1]首都医科大学附属北京佑安医院北京市肝病研究所,北京100069 [2]中国疾病预防控制中心性病艾滋病预防控制中心

出  处:《国际病毒学杂志》2017年第1期17-21,共5页International Journal of Virology

基  金:国家自然科学基金(81601796);首都卫生发展科研专项(2014-1-1151);北京市优秀人才培养资助青年骨干个人项目(2015000021469G183);佑安肝病艾滋病基金资助中青年人才孵育项目(YNKT20160015);北京市属医学科研院所公益发展改革试点项目(京医研2016-2)

摘  要:目的探讨HIV-1 gpl20准种在不同治疗效果的艾滋病患者抗病毒治疗前的特征差异。方法回顾性收集治疗方案为AZT+NVP+3TC的艾滋病患者在抗病毒治疗前的血浆样本,包括病毒抑制(vs)组12例,治疗失败(TF)组12例。采用单基因组扩增技术获得gp120准种序列,分析比较遗传多样性、氨基酸长度、潜在糖基化位点及特征性氨基酸的特点。结果本研究共获得gpl20序列365条序列,其中vs组168条(6-20条),TF组197条(7-28条)。TF组的gpl20准种复杂度高于vs组,差异有统计学意义(P=O.003);TF组的gpl20准种ds及dN中位数均高于vs组(P=0.017;P=0.002)。TF组HIV-1准种gpl20氨基酸长度长于VS组(P=0.001)。TF与vs组的gpl20准种相比共有9个氨基酸位点存在明显差异,多数分布在V1/V2区(6/9,66.6%)。结论不同治疗效果的艾滋病患者治疗前的HIV-1gpl20准种基因特征存在差异,TF组患者来源的HIV-1准种遗传多样性更高。Objective To investigate patients with different treatment outcomes quasispecies characteristics of HIV-I gpl20 from AIDS Methods Plasma samples of AIDS patients received AZT+NVP+3TC regimens were retrospectively collected, including 12 virologic suppression (VS) patients and 12 treatment failure (TF) patients. HIV-1 gp 120 quasispecies sequences by single genome amplification (SGA) methods were collected to study the characteristics and differences of quasispecies diversity, dS and dN, amino acid length, numbers of potential N-linked glycosylation sites (PNGS) and signature pattern between the two groups. Results A total of 365 gp 120 sequences were obtained, including 168 sequences (6-20) in VS group and 197 sequences (7-28) in TF groups. A higher diversity was noted for the variants in TF group than that VS group (P = 0.003). Median dS and dN were higher in TF group (P = 0.017, P = 0.002). A longer viral peptide in TF group was found (P = 0.001). Nine genetic signatures of gp 120 were identified in TF patients, and most of them belonged to V1/V2 region (6/9, 66.6%). Conclusions Quasispecies genetic characteristics are found between the two groups with different treatment outcome before antiviral therapy, which exhibit high quasispecies diversity in TF-derived strains.

关 键 词:Ⅰ型人类免疫缺陷病毒 GP120 准种 抗病毒治疗 治疗效果 

分 类 号:R512.91[医药卫生—内科学]

 

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