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作 者:罗阿蓉 李完波 王志勇[1] LUO Arong;LI Wanbo;WANG Zhiyong(Fisheries College&Key Laboratory of Healthy Mariculture for East China Sea of Ministry Agriculture and Rural Affairs,Jimei University,Xiamen 361021,China)
机构地区:[1]集美大学水产学院、农业农村部东海海水健康养殖重点实验室,福建厦门361021
出 处:《集美大学学报(自然科学版)》2023年第4期298-308,共11页Journal of Jimei University:Natural Science
基 金:国家自然科学基金项目(31872562);海水鱼类产业技术体系项目(CARS-47-G04)。
摘 要:从大黄鱼脾脏eQTL数据库中,筛选出调控免疫相关靶基因Cspg4的顺式作用区eQTL,通过Sanger测序验证了该eQTL区域中最显著的SNP位点的基因型。在此基础上,通过构建候选启动子区不同长度缺失片段的重组质粒测定活性,确定了Cspg4基因启动子核心区为-1202~-762和-190~+20,而携带Chr17_13952653突变位点的两种单倍型调控序列的活性均显著低于对照组,提示该调控序列可能为沉默子。In this study,the Cspg4 gene was cloned based on previous eQTL analysis in Larimichthys crocea,which was regulated by cis-eQTLs.The results of Sanger sequencing verified the genotypes of the most significant SNP Chr17_13952653 regulating Cspg4 gene.Subsequently,the core promoter regions of Cspg4 were determined to be from-1202 to-762 and from-190 to+20 through recombinant plasmids with different truncated fragments in the candidate promoter region.Further study found that the activity of the two haplotypes containing Chr17_13952653 site was significantly lower than that of the control group,suggesting that the sequence may be a silencer,and weaken the promoter activity in transcription.Our results provided useful information for elucidating the molecular mechanisms of cis-regulation of Cspg4 gene in L.crocea.
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