Phylogeography of <i>Asparagus schoberioides</i>Kunth (Asparagaceae) in Japan  

Phylogeography of <i>Asparagus schoberioides</i>Kunth (Asparagaceae) in Japan

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作  者:Tatsuya Fukuda In-Ja Song Hokuto Nakayama Takuro Ito Akira Kanno Hiroshi Hayakawa Yukio Minamiya Jun Yoko Yama 

机构地区:[1]不详

出  处:《American Journal of Plant Sciences》2011年第6期781-789,共9页美国植物学期刊(英文)

摘  要:To describe the phylogeographic structures of Asparagus schoberioides Kunth (Asparagaceae) in Japan, we investigated its nucleotide sequence variations with respect to its geographic distribution pattern. Sequencing of the internal transcribed spacer (ITS) 1 region in 29 samples of A. schoberioides revealed 20 polymorphic nucleotide sites. As a result, the 29 samples of A. schoberioides fell into 15 distinct haplotypes and phylogenetic analyses revealed these haplotypes fell into two major clades, Clade 1 and Clade 2. The haplotypes of Clade 1 were distributed chiefly along the Pacific Ocean side of Japan, while those of Clade 2 occurred mainly along the Japan Sea side. This result suggests that A. schoberioides has migrated via two routes in Japan.To describe the phylogeographic structures of Asparagus schoberioides Kunth (Asparagaceae) in Japan, we investigated its nucleotide sequence variations with respect to its geographic distribution pattern. Sequencing of the internal transcribed spacer (ITS) 1 region in 29 samples of A. schoberioides revealed 20 polymorphic nucleotide sites. As a result, the 29 samples of A. schoberioides fell into 15 distinct haplotypes and phylogenetic analyses revealed these haplotypes fell into two major clades, Clade 1 and Clade 2. The haplotypes of Clade 1 were distributed chiefly along the Pacific Ocean side of Japan, while those of Clade 2 occurred mainly along the Japan Sea side. This result suggests that A. schoberioides has migrated via two routes in Japan.

关 键 词:ASPARAGUS schoberioides Internal Transcribed SPACER (ITS) Phylogeny PHYLOGEOGRAPHY 

分 类 号:R73[医药卫生—肿瘤]

 

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