Supported by National Natural Science Foundation of China (Grant Nos 60573024 and 60573181);the Research Project of Shandong EconomicUniversity (01610784);NSF of Shandong Provice (2005BS01014)
Based on m-stems and semi-extensible structure, a model is presented to represent RNA planar pseudoknots, and corresponding dynamic programming algorithm is designed and implemented to predict arbitrary planar pseudok...