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作品数:269被引量:299H指数:7
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相关机构:山东大学清华大学南京大学华中科技大学更多>>
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Symmetry-protected and Brillouin zone folding driven bound states in the continuum in dielectric nanorod arrays for efficient third harmonic generation
《Chinese Physics B》2025年第3期390-398,共9页Wen-Jing Wang Shi-Jie Liang Jia-Qi Zou Yan-Yan Huo Ting-Yin Ning 
Project supported by the National Natural Science Foundation of China(Grant Nos.12174228 and 12274271)。
Two types of bound states in continuum(BICs),symmetry-protected and Brillouin zone folding driven,are identified in hollow Si nanorod arrays.By modulating the direction and distance of the air holes from the center of...
关键词:bound states in the continuum Brillouin zone folding third harmonic generation 
Single-molecule mechanical folding and unfolding kinetics of armless mitochondrial tRNA^(Arg) from Romanomermis culicivorax
《Chinese Physics B》2021年第10期651-659,共9页Yan-Hui Li Zhen-Sheng Zhong Jie Ma 
supported by the Natural Science Foundation of Guangdong Province,China(Grant No.2017A030310085);the Science and Technology Planning Project of Guangdong Province,China(Grant No.2018A050506034).
The mechanical stability of tRNAs contributes to their biological activities.The mitochondrial tRNAArg from Romanomermis culicivorax is the shortest tRNA ever known.This tRNA lacks D-and T-arms,represents a stem-bulge...
关键词:mitochondrial tRNA mechanical stability singlemolecule manipulation amino acid-chelated Mg^(2+) 
Equilibrium folding and unfolding dynamics to reveal detailed free energy landscape of src SH3 protein by magnetic tweezers被引量:2
《Chinese Physics B》2021年第7期595-599,共5页Huanhuan Su Hao Sun Haiyan Hong Zilong Guo Ping Yu Hu Chen 
the National Natural Science Foundation of China(Grant Nos.11874309 and 11474237);the 111 Project(Grant No.B16029)。
Src SH3 protein domain is a typical two-state protein which has been confirmed by research of denaturant-induced unfolding dynamics.Force spectroscopy experiments by optical tweezers and atomic force microscopy have m...
关键词:protein folding and unfolding magnetic tweezers free energy landscape transition state 
Structure-based simulations complemented by conventional all-atom simulations to provide new insights into the folding dynamics of human telomeric G-quadruplex
《Chinese Physics B》2021年第7期646-654,共9页Yun-Qiang Bian Feng Song Zan-Xia Cao Jia-Feng Yu Ji-Hua Wang 
the National Natural Science Foundation of China(Grant Nos.11504043,61671107,31670727,and 61771093);the Science Foundation of Shandong Province of China(Grant No.ZR2016JL027);the Taishan Young Scholars Program of Shandong Province of China(Grant No.tsqn20161049);the Youth Science and Technology Innovation Plan of Universities in Shandong,China(Grant No.2019KJE007)。
The hybrid atomistic structure-based model has been validated to be effective in investigation of G-quadruplex folding.In this study,we performed large-scale conventional all-atom simulations to complement the folding...
关键词:molecular dynamics simulation structure-based model all-atom model DNA G-quadruplex 
A network of conformational transitions in an unfolding process of HP-35 revealed by high-temperature MD simulation and a Markov state model
《Chinese Physics B》2018年第1期175-181,共7页邵丹丹 高恺夫 
Project supported by the National Natural Science Foundation of China(Grant Nos.11175068 and 11474117);the Self-determined Research Funds of CCNU from the Colleges Basic Research and Operation of MOE,China(Grant No.230-20205170054)
An understanding of protein folding/unfolding processes has important implications for all biological processes, in- eluding protein degradation, protein translocation, aging, and diseases. All-atom molecular dynamics...
关键词:molecular dynamics simulation Markov state model folding/unfolding HP-35 
Smoothing potential energy surface of proteins by hybrid coarse grained approach
《Chinese Physics B》2017年第5期30-36,共7页卢禹锟 周昕 欧阳钟灿 
Project supported by the National Basic Research Program of China(Grant No.2013CB932803);the National Natural Science Foundation of China(Grant No.11574310);the Joint NSFC-ISF Research Program;jointly funded by the National Natural Science Foundation of China;the Israel Science Foundation(Grant No.51561145002)
Coarse-grained(CG) simulations can more efficiently study large conformational changes of biological polymers but usually lose accuracies in the details. Lots of different hybrid models involving multiple different ...
关键词:coarse details overcome smoothing difficulty faster illustrate folding landscape preserved 
Mechano-chemical selections of two competitive unfolding pathways of a single DNA i-motif被引量:1
《Chinese Physics B》2014年第6期621-628,共8页徐悦 陈虎 璩玉杰 Artem K.Efremov 黎明 欧阳钟灿 刘冬生 严洁 
supported by Grants from the National Research Foundation through the Mechanobiology Institute Singapore and the Ministry of Education of Singapore(Grant No.MOE2012-T3-1-001)[to Yan J];the National Basic Research Program of China(Grant No.2013CB932800);the Major Research Plan of the National Natural Science Foundation of China(Grant Nos.91027046 and 91027045);the Fundamental Research Funds for the Central Universities(Grant No.2013121005)
The DNA i-motif is a quadruplex structure formed in tandem cytosine-rich sequences in slightly acidic conditions. Besides being considered as a building block of DNA nano-devices, it may also play potential roles in r...
关键词:single-molecule techniques I-MOTIF folding/structure of biomolecules mechanical proper-ties/biomolecules 
Symmetrical dynamical characteristic of peak and valley current-mode controlled single-phase H-bridge inverter被引量:2
《Chinese Physics B》2013年第11期226-231,共6页刘洪臣 李飞 苏振霞 孙立山 
Project supported by the National Natural Science Foundation of China(Grant No.51107016);the National Basic Research Program of China(Grant No.2013CB035605);the Postdoctoral Science Research Developmental Foundation of Heilongjiang Province,China(Grant No.LHB-Q12086)
Complex dynamical phenomenon was studied in the single phase H-bridge inverter which was controlled by either a peak current or a valley current. The state functions and the discrete iterative map equations were estab...
关键词:single-phase H-bridge inverter symmetrical dynamical phenomenon folding map bifurcation di-agram 
Functional structures and folding dynamics of two peptides
《Chinese Physics B》2005年第11期2365-2369,共5页盛乐标 李菁 马保亮 王炜 
Project supported by the National Natural Science Foundation of China (Grant Nos 90103031, 10474041, 90403120 and 10021001), and the Nonlinear Project (973) of the NSM.
The folding dynamics and structural characteristics of peptides RTKAWNRQLYPEW (P1) and RTKQLYPEW (P2) are investigated by using all-atomic simulation procedure CHARMM in this work. The results show that P1, a segm...
关键词:peptide folding molecular dynamics protein secondary structure prediction 
Folding of lattice protein model chains with fixed ends
《Chinese Physics B》2004年第9期1574-1581,共8页吉高峰 薛彬 王炜 
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