GENOME-WIDE

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Genome-wide circular RNAs signatures involved in sexual maturation and its heterosis in chicken
《Journal of Integrative Agriculture》2025年第2期697-711,共15页Yuanmei Wang Jingwei Yuan Yanyan Sun Aixin Ni Jinmeng Zhao Yunlei Li Panlin Wang Lei Shi Yunhe Zong Pingzhuang Ge Shixiong Bian Hui Ma Jilan Chen 
funded by the National Natural Science Foundation of China(32172721);the China Agriculture Research System(CARS-40);the Central Publicinterest Scientific Institution Basal Research Fund,China(2021-YWF-ZYSQ-12);the Agricultural Science and Technology Innovation Program of Chinese Academy of Agricultural Sciences(ASTIP-IAS04)。
Sexual maturation heterosis has been widely exploited in animal crossbreeding.However,the underlying mechanism has been rarely explored in chicken.In the present study,we performed the reciprocal crossing between Whit...
关键词：CHICKEN sexual maturation HETEROSIS OVARY circRNA 
Genome-wide investigation of defensin genes in apple(Malus×domestica Borkh.) and in vivo analyses show that MdDEF25 confers resistance to Fusarium solani
《Journal of Integrative Agriculture》2025年第1期161-175,共15页Mengli Yang Jian Jiao Yiqi Liu Ming Li Yan Xia Feifan Hou Chuanmi Huang Hengtao Zhang Miaomiao Wang Jiangli Shi Ran Wan Kunxi Zhang Pengbo Hao Tuanhui Bai Chunhui Song Jiancan Feng Xianbo Zheng 
supported by a project grant from the Key Research and Development and Promotion Projects of Henan Province,China(212102110113);the Special Fund for Henan Agriculture Research System,China(HARS-22-09-Z2).
Apple replant disease is a complex soil syndrome that occurs when the same fields are repeatedly utilized for apple orchard cultivation.It can be caused by various pathogens,and Fusarium solani is the main pathogen.Fu...
关键词：APPLE Fusarium solani DEFENSIN resistance replant disease 
Genome-wide identification and characterization of putative effectors in Heterodera schachtii that suppress plant immune response
《Journal of Integrative Agriculture》2025年第1期196-208,共13页Ke Yao Menghan Zhang Jianjun Xu Deliang Peng Wenkun Huang Ling'an Kong Shiming Liu Guangkuo Li Huan Peng 
supported by the Open Fund of the Key Laboratory of Integrated Pest Management on Crop in Northwestern Oasis,Ministry of Agriculture and Rural Affairsof China(KFJJ202101);the National KeyR&D Program of China(2021YFD1400100);the National Natural Science Foundation of China(31972247);the Tianchi Talent Introduction Program in Xinjiang Uygur Autonomous Region,China and the Science and Technology Innovation Project of the Chinese Academy of Agricultural Sciences.
The sugar beet cyst nematode(Heterodera schachtii) is one of the most destructive pathogens in sugar beet production, which causes serious economic losses every year. Few molecular details of effectors of H. schachtii...
关键词：sugar beet cyst nematode Heterodera schachti effector-triggered immunity hypersensitive response EFFECTOR 
Genome-wide analyses of mi RNAs in mycorrhizal plants in response to late blight and elucidation of the role of miR319c in tomato resistance
《Horticultural Plant Journal》2024年第6期1371-1382,共12页Xiaoxu Zhou Zhengjie Wang Chenglin Su Jun Cui Jun Meng Yushi Luan 
supported by the National Natural Science Foundation of China (Grant Nos.32230091,32072592)。
Tomato(Solanum lycopersicum), an economically important vegetable crop cultivated worldwide, often suffers massive financial losses due to Phytophthora infestans(P. infestans) spread and breakouts. Arbuscular mycorrhi...
关键词：TOMATO Arbuscular mycorrhiza fungi Phytophthora infestans miRNA 
Genome-Wide Identification,Characterization,and Expression Analyses of the Mucin Genes in Japanese Flounder(Paralichthys olivaceus)
《Journal of Ocean University of China》2024年第6期1595-1607,共13页ZHU Ying YANG Xinsheng YAN Xu YANG Ning CAO Min GAO Chengbin LI Chao 
supported by Young Experts of Taishan Scholars(No.tsqn 201909130);the Science and Technology Support Plan for Youth Innovation of Colleges and Universities in Shandong Province(No.2019KJF003);the Shandong Technical System of Fish Industry(No.SDAIT12-03),the Natural Science Foundation of Shandong Province(No.ZR2022QC037);the High-Level Talents Research Fund of Qingdao Agricultural University(No.663/1120033)。
Mucin family members play an indispensable role in immunity against pathogen invasion.Currently,there are very few studies on members of the mucin family in Japanese flounder Paralichthys olivaceus.In this regard,we c...
关键词：MUCINS Japanese flounder expression patterns Edwardsiella tarda 
Genome-wide identification,molecular evolution,and functional characterization of fructokinase gene family in apple reveal its role in improving salinity tolerance
《Journal of Integrative Agriculture》2024年第11期3723-3736,共14页Jing Su Lingcheng Zhu Pingxing Ao Jianhui Shao Chunhua Ma 
supported by the Yunnan Provincial Science and Technology Department Agriculture Joint Project,China(202301BD070001-020)。
Fructokinase(FRK)is a regulator of fructose signaling in plants and gateway proteins that catalyze the initial step in fructose metabolism through phosphorylation.Our previous study demonstrated that MdFRK2 protein ex...
关键词：APPLE FRUCTOKINASE evolutionary patterns MdFRK2 salinity tolerance 
Genome-wide identification of the pectate lyase(PEL)gene family members in Malvaceae,and their contribution to cotton fiber quality被引量：1
《Journal of Integrative Agriculture》2024年第10期3264-3282,共19页Qian Deng Zeyu Dong Zequan Chen Zhuolin Shi Ting Zhao Xueying Guan Yan Hu Lei Fang 
supported by the Ministry of Agriculture and Rural Affairs,China(2023ZD04039-01);the National Natural Science Foundation of China(32172008);the Leading Innovative and Entrepreneur Team Introduction Program of Zhejiang,China(2019R01002)。
Pectin is a major constituent of the plant cell wall.Pectate lyase(PEL,EC 4.2.2.2)uses anti-β-elimination chemistry to cleave theα-1,4 glycosidic linkage in the homogalacturonan region of pectin.However,limited info...
关键词：MALVACEAE pectate lyase(PEL) Gossypium species fiber quality 
Grain Protein Content Phenotyping in Rice via Hyperspectral Imaging Technology and a Genome-Wide Association Study
《Plant Phenomics》2024年第3期684-695,共12页Hengbiao Zheng Weijie Tang Tao Yang Meng Zhou Caili Guo Tao Cheng Weixing Cao Yan Zhu Yunhui Zhang Xia Yao 
supported by the National Key Research and Development Program of China(2021YFD2000100);the National Natural Science Foundation of China(32101617);the Fundamental Research Funds for the Central Universities(JSJL2023005);the Zhongshan Biological Breeding Laboratory(ZSBBL-KY2023-05);the Key Independent Research Project of Jjiangsu Key Laboratory of Information Agriculture(KLIAZZ2301);the Jiangsu Collaborative Innovation Center for Modern Crop Production(JCICMCP).
Efficient and accurate acquisition of the rice grain protein content(GPC)is important for selecting high-quality rice varieties,and remote sensing technology is an attractive potential method for this task.However,the...
关键词：ASSOCIATION technology content imaging protein GRAIN study RICE GENOME-WIDE HYPERSPECTRAL 
Genome-Wide Discovery and Expression Profiling of the SWEET Sugar Transporter Gene Family in Woodland Strawberry (Fragaria vesca) under Developmental and Stress Conditions: Structural and Evolutionary Analysis
《Phyton-International Journal of Experimental Botany》2024年第7期1485-1502,共18页Shoukai Lin Yifan Xiong Shichang Xu Manegdebwaoaga Arthur Fabrice Kabore Fan Lin Fuxiang Qiu 
funded by the Fujian Provincial Science and Technology Project(2021N5014,2022N5006);the Key Research Project of the Putian Science and Technology Bureau(2021ZP08,2021ZP09,2021ZP10,2021ZP11,2023GJGZ001).
The SWEET(sugar will eventually be exported transporter)family proteins are a recently identified class of sugar transporters that are essential for various physiological processes.Although the functions of the SWEET p...
关键词：Woodland strawberry SWEET gene sugar transporter genome-wide identification characterization expression 
Identification of new cotton fiber-quality QTL by multiple genomic analyses and development of markers for genomic breeding
《The Crop Journal》2024年第3期866-879,共14页Haozhe Tan Binghui Tang Mengling Sun Qiulu Yin Yizan Ma Jianying Li Pengcheng Wang Zhonghua Li Guannan Zhao Maojun Wang Xianlong Zhang Chunyuan You Lili Tu 
supported by National Key Research and Development Program of China(2022YFF1001400);the National Natural Science Foundation of China(31830062 and 32172071);Innovation and Application of Superior Crop Germplasm Resources of Shihezi(2021NY01);Breeding of New Cotton Varieties and Application of Transgenic Breeding Technology(2022NY01)。
Cotton fiber is one of the main raw materials for the textile industry.In recent years,many cotton fiber quality QTL have been identified,but few were applied in breeding.In this study,a genome wide association study(...
关键词：Cotton fiber quality breeding GWAS Genome-wide selective sweep analysis Genomic selection InDel markers 
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