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作品数:510被引量:667H指数:10
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相关作者:过惠平赵晶谢晓峰赵成明张亮更多>>
相关机构:飞思卡尔半导体(中国)有限公司施耐德电气有限公司第二炮兵工程学院北京师范大学更多>>
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Efficient Flexible Boundary Conditions for Long Dislocations
《Communications in Computational Physics》2022年第8期671-714,共44页M.Hodapp 
Financial support from the Fonds National Suisse(FNS),Switzerland,(project 191680)is highly acknowledged.
We present a novel efficient implementation of the flexible boundary condition(FBC)method,initially proposed by Sinclair et al.,for large single-periodic problems.Efficiency is primarily achieved by constructing a hie...
关键词:Atomistic/continuum coupling flexible boundary conditions local/global coupling lattice Green functions hierarchical matrices dislocations 
A Posteriori Error Estimate and Adaptive Mesh Refinement Algorithm for Atomistic/Continuum Coupling with Finite Range Interactions in Two Dimensions
《Communications in Computational Physics》2020年第1期198-226,共29页Mingjie Liao Ping Lin Lei Zhang 
supported by National Natural Science Foundation of China grant 11861131004,11771040,91430106;supported by Natural Science Foundation of China grant 11871339,11861131004,11571314,11471214 and the One Thousand Plan of China for young scientists.
In this paper,we develop the residual based a posteriori error estimates and the corresponding adaptive mesh refinement algorithm for atomistic/continuum(a/c)coupling with finite range interactions in two dimensions.W...
关键词:Atomistic models coarse graining atomistic-to-continuum coupling quasicontin-uum method a posteriori error estimate 
A Stabilized Finite Element Method for Modified Poisson-Nernst-Planck Equations to Determine Ion Flow Through a Nanopore
《Communications in Computational Physics》2014年第1期93-125,共33页Jehanzeb Hameed Chaudhry Jeffrey Comer Aleksei Aksimentiev Luke N.Olson 
The conventional Poisson-Nernst-Planck equations do not account for the finite size of ions explicitly.This leads to solutions featuring unrealistically high ionic concentrations in the regions subject to external pot...
关键词:Steric effects nucleic acids ionic current continuum transport theory ion channels PNP SUPG finite element method. 
A Unified Gas-Kinetic Scheme for Continuum and Rarefied Flows III:Microflow Simulations被引量:5
《Communications in Computational Physics》2013年第10期1147-1173,共27页Juan-Chen Huang Kun Xu Pubing Yu 
Hong Kong Research Grant Council(621709,621011)and grants SRFI11SC05 and RPC10SC11 atHKUST.J.C.Huang was supported by National Science Council of Taiwan through grant No.NSC 100-2221-E-019-048-MY3.
Due to the rapid advances inmicro-electro-mechanical systems(MEMS),the study of microflows becomes increasingly important.Currently,the molecular-based simulation techniques are the most reliable methods for rarefied ...
关键词:Unified scheme non-equilibrium microflow thermal creep flows 
A Modified Nonlocal Continuum Electrostatic Model for Protein in Water and Its Analytical Solutions for Ionic Born Models被引量:1
《Communications in Computational Physics》2013年第1期174-194,共21页Dexuan Xie Hans W.Volkmer 
partially supported by the National Science Foundation,USA,through grant DMS-0921004.
A nonlocal continuum electrostatic model,defined as integro-differential equations,can significantly improve the classic Poisson dielectric model,but is too costly to be applied to large protein simulations.To sharply...
关键词:Nonlocal continuum electrostatic models Poisson dielectric equations protein-water interface problem nonlocal ionic Born models 
Quantum Dynamics in Continuum for Proton Transport I:Basic Formulation
《Communications in Computational Physics》2013年第1期285-324,共40页Duan Chen Guo-Wei Wei 
supported in part by NSF grant CCF-0936830;NIH grant R01GM-090208;MSU Competitive Discretionary Funding Program grant 91-4600.
Proton transport is one of the most important and interesting phenomena in living cells.The present work proposes a multiscale/multiphysics model for the understanding of the molecular mechanism of proton transport in...
关键词:Proton transport quantum dynamics in continuum multiscale model PoissonBoltzmann equation generalized Kohn-Sham equation variational principle 
A Unified Gas-Kinetic Scheme for Continuum and Rarefied Flows Ⅱ:Multi-Dimensional Cases被引量:9
《Communications in Computational Physics》2012年第8期662-690,共29页Juan-Chen Huang Kun Xu Pubing Yu 
supported by Hong Kong Research Grant Council 621709 and 621011,National Natural Science Foundation of China(Project No.10928205);National Key Basic Research Program(2009CB724101);J.C.Huang was supported by National Science Council of Taiwan through grant no.NSC 100-2221-E-019-048-MY3。
With discretized particle velocity space,a multi-scale unified gas-kinetic scheme for entire Knudsen number flows has been constructed based on the kinetic model in one-dimensional case[J.Comput.Phys.,vol.229(2010),pp...
关键词:Unified scheme non-equilibrium flow Navier-Stokes solution 
Dynamical Coupling Atomistic and Continuum Simulations
《Communications in Computational Physics》2011年第10期1305-1314,共10页Guowu Ren Dier Zhang Xin-Gao Gong 
supported by the National Science Foundation of China,the special funds for major state basic research,and Shanghai municipality and MOE.The computations were performed at Fudan Supercomputer Center.
We propose a newmultiscalemethod that couplesmolecular dynamics simulations(MD)at the atomic scale and finite element simulations(FE)at the continuum regime.By constructing the mass matrix and stiffness matrix depende...
关键词:Multiscale method finite element phonon filter method 
Bridging Methods for Atomistic-to-Continuum Coupling and Their Implementation
《Communications in Computational Physics》2010年第4期831-876,共46页Pablo Seleson Max Gunzburger 
This work was supported by the Department of Energy under grant number DE-FG02-05ER25698.
Several issues connected with bridging methods for atomistic-to-continuum(AtC)coupling are examined.Different coupling approaches using various energy blending models are studied as well as the influence that model pa...
关键词:Multiscale modeling atomistic-to-continuum coupling boundary treatment 
Hydrophobic Effect in a Continuum Model of the Lipid Bilayer
《Communications in Computational Physics》2009年第8期655-672,共18页Phillip L.Wilson Huaxiong Huang Shu Takagi 
We study a continuum paradigm of the lipid bilayer based on minimizing the free energy of a mixture of water and lipid molecules.This paper extends previous work of Blom and Peletier[European J.Appl.Math.,15(2004),pp....
关键词:Lipid bilayer free energy continuum model numerical minimization 
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