GENOME-WIDE

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Identification of new cotton fiber-quality QTL by multiple genomic analyses and development of markers for genomic breeding
《The Crop Journal》2024年第3期866-879,共14页Haozhe Tan Binghui Tang Mengling Sun Qiulu Yin Yizan Ma Jianying Li Pengcheng Wang Zhonghua Li Guannan Zhao Maojun Wang Xianlong Zhang Chunyuan You Lili Tu 
supported by National Key Research and Development Program of China(2022YFF1001400);the National Natural Science Foundation of China(31830062 and 32172071);Innovation and Application of Superior Crop Germplasm Resources of Shihezi(2021NY01);Breeding of New Cotton Varieties and Application of Transgenic Breeding Technology(2022NY01)。
Cotton fiber is one of the main raw materials for the textile industry.In recent years,many cotton fiber quality QTL have been identified,but few were applied in breeding.In this study,a genome wide association study(...
关键词：Cotton fiber quality breeding GWAS Genome-wide selective sweep analysis Genomic selection InDel markers 
Genome-wide and candidate gene association studies identify BnPAP17 as conferring the utilization of organic phosphorus in oilseed rape
《Journal of Integrative Agriculture》2024年第4期1134-1149,共16页Ping Xu Hao Li Haiyuan Li Ge Zhao Shengjie Dai Xiaoyu Cui Zhenning Liu Lei Shi Xiaohua Wang 
financially supported by the National Natural Science Foundation of China(32201868 and 32001575)。
Phosphorus(P)is essential for living plants,and P deficiency is one of the key factors limiting the yield in rapeseed production worldwide.As the most important organ for plants,root morphology traits(RMTs)play a key ...
关键词：genome-wide association studies(GWAS) root morphology traits(RMTs) organic phosphorus(Po) oilseed rape BnPAP17 
Associations of genome-wide structural variations with phenotypic differences in cross-bred Eurasian pigs被引量：1
《Journal of Animal Science and Biotechnology》2024年第1期68-87,共20页Wencheng Zong Jinbu Wang Runze Zhao Naiqi Niu Yanfang Su Ziping Hu Xin Liu Xinhua Hou Ligang Wang Lixian Wang Longchao Zhang 
supported by the National Key R&D Program of China(2021YFD1301101);National Swine Industry Technology System(CARS-35);Agricultural Science and Technology Innovation Program(ASTIP-IAS02)。
Background During approximately 10,000 years of domestication and selection,a large number of structural variations(SVs)have emerged in the genome of pig breeds,profoundly influencing their phenotypes and the ability ...
关键词：Body size GWAS PIG SKELETON Structural variations 
LncPheDB:a genome-wide lncRNAs regulated phenotypes database in plants被引量：2
《aBIOTECH》2022年第3期169-177,共9页Danjing Lou Fei Li Jinyue Ge Weiya Fan Ziran Liu Yanyan Wang Jingfen Huang Meng Xing Wenlong Guo Shizhuang Wang Weihua Qiao Zhenyun Han Qian Qian Qingwen Yang Xiaoming Zheng 
supported by the National Key Research and Development Program of China(2021YFD1200101 to Z.X.M.);the National Natural Science Foundation of China(31670211 and 31970237 to Z.X.M.);Sanya Yazhou Bay Science and Technology City(SKJC-2020–02-001 to Z.X.M.);the Central Public-interest Scientific Institution Basal Research Fund(S2021ZD01 to Z.X.M.).
LncPheDB(https://www.lncphedb.com/)is a systematic resource of genome-wide long non-coding RNAs(lncRNAs)-phenotypes associations for multiple species.It was established to display the genome-wide lncRNA annotations,ta...
关键词：LncRNA GWAS PHENOTYPE SNP PLANTS 
Genetic sources and loci for wheat head blast resistance identified by genome-wide association analysis
《The Crop Journal》2022年第3期793-801,共9页Lei Wu Xinyao He Muhammad Rezaul Kabir Krishna KRoy Md.Babul Anwar Felix Marza Yi He Peng Jiang Xu Zhang Pawan K.Singh 
financial support through the CGIAR Research Program on WHEAT;the National Natural Science Foundation of China(31561143004)。
The emergence and spread of wheat blast caused by fungal pathogen Magnaporthe oryzae pathotype Triticum is a threat to global wheat production.The resistance level and genetic loci for blast resistance in Chinese germ...
关键词：Magnaporthe oryzae pathotype Triticum Host resistance Wheat blast GWAS 
Genome-wide markers for seed yield and disease resistance in perennial ryegrass
《The Crop Journal》2022年第2期508-514,共7页Kristina Jaškune Vilma Kemešyte Andrius Aleliūnas Grazina Statkeviciute 
the framework of the long-term research program"Genetic determination of the traits of agricultural and forest plants,development of modern cultivars"and"Genome-wide functional analysis of perennial ryegrass for improved growth under water limiting conditions(Grow Gene)"project funded by the Research Council of Lithuania(S-MIP-17-24)。
The market success of perennial ryegrass(Lolium perenne L.) cultivars depends on sufficient seed production, as they are propagated by seed. However, breeding for high quality forage production reduces seed yield, and...
关键词：Crown rust Puccinia coronata f.sp.lolli Flag-leaf length Genome-wide association study(GWAS) Seed yield Lolium perenne L. 
Identification of blast-resistance loci through genome-wide association analysis in foxtail millet(Setaria italica (L.)Beauv.)被引量：2
《Journal of Integrative Agriculture》2021年第8期2056-2064,共9页LI Zhi-jiang JIA Guan-qing LI Xiang-yu LI Yi-chu ZHI Hui TANG Sha MA Jin-feng ZHANG Shuo LI Yan-dong SHANG Zhong-lin DIAO Xian-min 
This research was supported by the National Key R&D Program of China(2018YFD1000706 and 2018YFD1000700);the National Natural Science Foundation of China(31871630 and 31771807);the earmarked fund for China Agriculture Research System of MOF and MARA(CARS-06-13.5);the Agricultural Science and Technology Innovation Program of the Chinese Academy of Agricultural Sciences,and the Heilongjiang Academy of Agricultural Sciences Research Program,China(2018JJPY005).
Blast disease caused by the fungus Magnaporthe grisea results in significant yield losses of cereal crops across the world.To date,very few regulatory genes contributing to blast resistance in grass species have been ...
关键词：foxtail millet blast resistance core collection GWAS 
Genome-wide Association Analysis of Maize Flowering Traits
《Asian Agricultural Research》2020年第12期43-46,62,共5页Haiying ZHANG Shu GAO Binyang LI Haixu ZHONG Zhicheng ZHANG Bowen LUO 
Sichuan Science and Technology Support Project(2016NYZ-0049,2016NZ0103).
Flowering regulation is important for maize to adapt to a variety of environments as well as associated with high yield.In this study,the genetic mechanism of three flowering traits of 310 maize inbred lines with rich...
关键词：MAIZE Flowering trait Genome-wide association analysis(GWAS) 
Genome-Wide Identification of Candidate Genes Associated with β-glucan Traits in a Hulled and Hulless Barley (Hordeum vulgare L.) Population被引量：1
《Phyton-International Journal of Experimental Botany》2020年第4期987-997,共11页Longhua Zhou Ting He Guimei Guo Jing Li Ruiju Lu Yingbo Li Chenghong Liu 
This work was supported by the Shanghai Agriculture Applied Technology Development Program,China(Grant No.G2017-02-08-00-08-F00074);the Key Technology R&D Project of Shanghai Agriculture-developed with Science&Technology Program,China(Grant No.2018(1-2));the earmarked fund for China Agriculture Research System(CARS-05-01A-02).
Barley grain is a valuable source ofβ-glucan,which is an important component of dietary fiber with significant human health benefits.Although the genetic basis ofβ-glucan biosynthesis has been widely studied,a genom...
关键词：GWAS Β-GLUCAN SNP BARLEY grains 
Genome-wide linkage mapping of QTL for root hair length in a Chinese common wheat population
《The Crop Journal》2020年第6期1049-1056,共8页Feng Huang Zhaoyan Chen Dejie Du Panfeng Guan Lingling Chai Weilong Guo Zhaorong Hu Mingming Xin Huiru Peng Yingyin Yao Zhongfu Ni 
supported by the National Key Research and Development Program of China(2017YFD0101004);the National Natural Science Foundation of China(31991214)。
Root hairs are fast growing,ephemeral tubular extensions of the root epidermis that aid nutrient and water uptake.The aim of the present study was to identify QTL for root hair length(RHL)using 227 F8 recombinant inbr...
关键词：GWAS QTL mapping STARP marker Triticum aestivum 
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