PLASTOME

作品数：55被引量：113H指数：5
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相关领域：生物学更多>>
相关作者：李建华更多>>
相关机构：浙江大学教育部更多>>
相关期刊：《Plant Diversity》《American Journal of Plant Sciences》《Science Bulletin》《Journal of Systematics and Evolution》更多>>
相关基金：国家自然科学基金更多>>
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An integrative approach clarifies species delimitation and biogeographic history of Debregeasia(Urticaceae)
《Plant Diversity》2025年第2期229-243,共15页Amos Kipkoech Ke Li Richard I.Milne Oyetola Olusegun Oyebanji Moses C.Wambulwa Xiao-Gang Fu Dennis A.Wakhungu Zeng-Yuan Wu Jie Liu 
funded by the National Natural Science Foundation of China(42171071,42211540718);Key Research Program of Frontier Sciences,CAS(ZDBS-LY-7001);Yunnan Fundamental Research Projects(202401AT070190,202201BC070001);Top-notch Young Talents Project of Yunnan Provincial“Ten Thousand Talents Program”(YNWR-QNBJ-2018-146,YNWR-QNBJ-2020-293);CAS“Light of West China”Program;supported by the China Scholarship Council(202304910135 and 202304910138)for a one-year study at the University of Toronto.
Integrative data from plastid and nuclear loci are increasingly utilized to resolve species boundaries and phylogenetic relationships within major angiosperm clades.Debregeasia(Urticaceae),an economically important ge...
关键词：Debregeasia PLASTOME PHYLOGENOMICS Reticulate evolution Species delimitation Ultra-barcodes 
A revised classification of Dryopteridaceae based on plastome phylogenomics and morphological evidence,with the description of a new genus,Pseudarachniodes
《Plant Diversity》2025年第1期34-52,共19页Zheng-Yu Zuo Germinal Rouhan Shi-Yong Dong Hong-Mei Liu Xin-Yu Du Li-Bing Zhang Jin-Mei Lu 
funded by the National Natural Science Foundation of China(Grant No.31970232);the National Key Basic Research Program of China(Grant No.2014CB954100).
Dryopteridaceae are the largest fern family and include nearly 20%of extant fern diversity,with 24 currently recognized genera.Recognition and delineation of genera within this family have varied greatly.The three-sub...
关键词：Ctenitidoideae Infra-familial Morphological diagnostic characters PHYLOGENOMICS Rachis-costae architecture Stigmatopetris 
Comparative analysis of 326 chloroplast genomes in Chinese jujube(Ziziphus jujuba):Structural variations,horizontal gene transfer events,and evolutionary patterns impacting its domestication from wild jujube
《Journal of Systematics and Evolution》2024年第6期1069-1084,共16页Meng Yang Shu-Feng Zhang Bin Li Yun-Xin Lan Yi-Han Yang Meng-Jun Liu 
supported by the projects of the General Program of the National Natural Science Foundation of China(Grant No.32171817);the General Program of the Natural Science Foundation of Hebei Province,China(Grant No.C2022204030);the Special Research Projects for the New Talent of Hebei Agricultural University,Hebei Province,China(Grant No.YJ2020025);the Basic Scientific Research of Colleges and Universities in Hebei Province(Grant No.KY2022005);the Hebei Province Key R&D Program(21326304D).
Jujube(Ziziphus jujuba Mill.),renowned for its nutritional value and health benefits,is believed to have originated in the middle and lower reaches of the Yellow River in China,where it underwent domestication from wi...
关键词：CHLOROPLAST DOMESTICATION horizontal gene transfer JUJUBE PLASTOME 
Genetic diversity and evolution of the plastome in allotetraploid cotton(Gossypium spp.)
《Journal of Systematics and Evolution》2024年第6期1118-1136,共19页Xin-Lin Yan Sheng-Long Kan Mei-Xia Wang Yong-Yao Li Luke RTembrock Wen-Chuang He Li-Yun Nie Guan-Jing Hu Dao-Jun Yuan Xiong-Feng Ma Zhi-Qiang Wu 
supported by the Science Technology and Innovation Commission of Shenzhen Municipality(Grant No.RCYX20200714114538196);the National Natural Science Foundation of China(Grant No.31970244);the National Key Laboratory of Cotton Bio-breeding and Integrated Utilization,the State Key Laboratory of Cotton Biology Open Fund(Grant No.CB2022A10);the Chinese Academy of Agricultural Sciences Elite Youth Program(Grant No.110243160001007);the Shenzhen Fundamental Research Program(Grant No.JCYJ20220818103212025);this work was also funded by the Guangdong Pearl River Talent Program(Grant No.2021QN02N792);the National Key Research and Development Plan(Grant No.2021YFF1000102);the Innovation Program of Chinese Academy of Agricultural Sciences.
Cotton (Gossypium spp.) is a vital global source of renewable fiber and ranks among the world's most important cash crops. While extensive nuclear genomic data of Gossypium has been explored, the organellar genomic re...
关键词：crop wild relatives G.barbadense G.hirsutum pan-plastome POLYPLOIDY 
The Bryophyte Phylogeny Group:A revised familial classification system based on plastid phylogenomic data被引量：4
《Journal of Systematics and Evolution》2024年第4期577-588,共12页Yun-Feng Li Lian Luo Yang Liu Qiang He Ning-Ning Yu Naren Gaowa Zhao-Qin Yi Jun-Jie Wang Wei Han Tao Peng Boon-Chuan Ho Xiaolan He Li Zhang Zhi-Duan Chen Yu Jia Qing-Hua Wang 
supported by National Natural Science Foundation of China(grant no.31970214);the Science Fund for Creative Research Groups of the National Natural Science Foundation of China(grant no.322210o1);the Open Research Foundation of State Key Laboratory of Systematic and Evolutionary Botany,Institute of Botany,Chinese Academy of Sciences(grant no.LSEB2o21-2);the Scientific Foundation of the Urban Management Bureau of Shenzhen(grant no.202203);the Natural Science Foundation of Fujian Province(grant no.2023J011022);Scientific Research Foundation for Highlevel Talent of Sanming University(grant no.20YG02).
Bryophytes,a monophyletic group comprising three major lineages,diversified soon after the terrestrialization of land plants.However,their internal phylogenetic relationships remain controversial.In this study,we reco...
关键词：HORNWORTS Hypnanae LIVERWORTS MOSSES PLASTOME taxonomy 
Central Asia revealed as a key area in evolution of Eremurus (Asphodelaceae)
《Plant Diversity》2024年第3期333-343,共11页Dilmurod Makhmudjanov Sergei Volis Ziyoviddin Yusupov Inom Juramurodov Komiljon Tojibaev Tao Deng Hang Sun 
supported by grants from the Key Projects of the Joint Fund of the National Natural Science Foundation of China (U23A20149);the Second Tibetan Plateau Scientific Expedition and Research (STEP) program (2019QZKK0502);the Strategic Priority Research Program of the Chinese Academy of Sciences (XDA20050203);International Partnership Program of the Chinese Academy of Sciences (151853KYSB20180009);the state research project Taxonomic revision of polymorphic plant families of the flora of Uzbekistan’ (FZ-20200929321);the State Programs for the years 2021-2025 ’Grid mapping of the flora of Uzbekistan’ and the ’Tree of life:monocots of Uzbekistan’ of the Institute of Botany of the Academy of Sciences of the Republic of Uzbekistan
Eremurus was described at the beginning of the 19th century.However,due to limited sampling and the small number of gene markers to date,its phylogeny and evolution are largely unknown.In this study,we analyzed plasto...
关键词：ASPHODELACEAE Asphodeloideae PLASTOME Central Asia Qinghai-Tibet Plateau 
Expansions and contractions of the inverted repeat,as well as gene loss and potential pseudogenization shape plastome evolution in Hechtioideae(Bromeliaceae,Poales)
《Journal of Systematics and Evolution》2024年第3期421-437,共17页Ivón M.Ramírez-Morillo Laura A.Espinosa-Barrera Carolina Granados Mendoza Sandra I.Vera-Paz Daniel D.Díaz Contreras Díaz Katya J.Romero-Soler 
funded by the“Consejo Nacional de Ciencia y Tecnologia” (CONACYT)projects No.183281 and No.283357 granted to I.M.R.-M.
Full plastomes have recently proven to be a valuable data source for resolving recalcitrant phylogenetic relationships in the flowering plant family Bromeliaceae.The study of complete plastomes has additionally led to...
关键词：BROMELIACEAE Hechtioideae ndh gene family phylogenetic informativeness PHYLOGENOMICS plastid genome structural rearrangements 
Cryptic diversity and rampant hybridization in annual gentians on the Qinghai-Tibet Plateau revealed by population genomic analysis
《Plant Diversity》2024年第2期194-205,共12页Peng-Cheng Fu Qiao-Qiao Guo Di Chang Qing-Bo Gao Shan-Shan Sun 
financial support provided by the Foundation of Henan Educational Committee (22A180024);Natural Science Foundation of Henan Province (232300420212)。
Understanding the evolutionary and ecological processes involved in population differentiation and speciation provides critical insights into biodiversity formation. In this study, we employed 29,865 single nucleotide...
关键词：Gentiana aristata Hybrid zone Qinghai-Tibet Plateau PLASTOME Nuclear SNPs 
Historical biogeography and evolutionary diversification of Lilium(Liliaceae): New insights from plastome phylogenomics被引量：2
《Plant Diversity》2024年第2期219-228,共10页Nian Zhou Ke Miao Changkun Liu Linbo Jia Jinjin Hu Yongjiang Huang Yunheng Ji 
financially supported by the National Natural Science Foundation of China (31872673);Yunnan Revitalization Talent Support Program “Top Team” Project (202305AT350001);the NSFC-Joint Foundation of Yunnan Province (U1802287)。
Here, we infer the historical biogeography and evolutionary diversification of the genus Lilium. For this purpose, we used the complete plastomes of 64 currently accepted species in the genus Lilium(14plastomes were n...
关键词：Asian monsoon Climatic changes Distribution range Evolutionary complexity Radiative diversification Species diversity Qinghai-Tibet Plateau(QTP) 
Phylogenomic insights into the reticulate evolution of Camellia sect.Paracamellia Sealy(Theaceae)
《Journal of Systematics and Evolution》2024年第1期38-54,共17页Sheng-Yuan Qin Kai Chen Wen-Ju Zhang Xiao-Guo Xiang Zheng-Yu Zuo Cen Guo Yao Zhao Lin-Feng Li Yu-Guo Wang Zhi-Ping Song Ji Yang Xiao-Qiang Yang Jian Zhang Wei-Tao Jin Qiang Wen Song-zi Zhao Jia-Kuan Chen De-Zhu Li Jun Rong 
supported by the National Natural Science Foundation of China(NSFC Grant No.31870311);the"Gan-Po Talent 555"Project of Jiangxi Province;the Natural Science Foundation of Jiangxi Province(Grant No.20212BAB205019),China.
Polyploids are common in Camellia sect.Paracamellia,which contain many important oil crop species.However,their complex evolutionary history is largely unclear.In this study,22 transcriptomes and 19 plastomes of relat...
关键词：Camellia oleifera hybridization PHYLOGENOMICS PLASTOME POLYPLOIDIZATION transcriptome 
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