GENOMES

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The hidden diversity and functional potential of Chloroflexota genomes in arsenic and antimony co-contaminated soils
《Soil Ecology Letters》2025年第1期91-104,共14页Heng Wang Qiusheng Wu Hengyi Wang Fukang Liu Debin Wu Xiaofang Wang Quan Yuan 
financially supported by the National Key Research and Development Program of China(Grant No.2020YFC1807700);by complementary fund from the Guizhou Provincial Department of Science and Technology;by Guizhou Provincial 2021 Science and Technology Subsidies(Grant No.GZ2021SIG);by the Chinese Academy of Sciences"Light of West China"Program;by Guizhou Provincial Science and Technology Projects(Grant No.ZK[2022]328).
Microorganisms were reported to be the indicators and drivers of metal(loid)s-contaminated soils.Chloroflexota is a widelydistributed phylum in arsenic(As)and antimony(Sb)contaminated soils,but the diversity and funct...
关键词：Chloroflexota genomes DIVERSITY functional potential arsenic and antimony pollution nutrient limitation 
The evolutionarily diverged single-stranded DNA-binding proteins SSB1/SSB2 differentially affect the replication,recombination and mutation of organellar genomes in Arabidopsis thaliana
《Plant Diversity》2025年第1期127-135,共9页Weidong Zhu Jie Qian Yingke Hou Luke R.Tembrock Liyun Nie Yi-Feng Hsu Yong Xiang Yi Zou Zhiqiang Wu 
supported by grants from the National Natural Science Foundation of China(32170238,32400191);Guangdong Basic and Applied Basic Research Foundation(2023A1515111029);the Science,Technology and Innovation Commission of Shenzhen Municipality(RCYX20200714114538196);the Chinese Academy of Agricultural Sciences Elite Youth Program(grant 110243160001007);the Guangdong Pearl River Talent Program(2021QN02N792)。
Single-stranded DNA-binding proteins(SSBs)play essential roles in the replication,recombination and repair processes of organellar DNA molecules.In Arabidopsis thaliana,SSBs are encoded by a small family of two genes(...
关键词：SSB Organellar genomes REPLICATION Recombination MUTATION 
Genomic insights into demographic history,structural variation landscape,and complex traits from 514 Hu sheep genomes
《Journal of Genetics and Genomics》2025年第2期245-257,共13页Kaiyu Chen Yuelang Zhang Yizhe Pan Xin Xiang Chen Peng Jiayi He Guiqing Huang Zhengguang Wang Pengju Zhao 
supported by grants from the Zhejiang Science and Technology Department Project(2023C04004);Zhejiang Science and Technology Major Program on Agricultural New Variety Breeding(2021C02068-6);Department of Science Technology of Huzhou City(2023GZ33);Zhejiang Team Technology Ambassador Project(Tongxiang);the National Natural Science Foundation of China(32172724).
Hu sheep is an indigenous breed from the Taihu Lake Plain in China,known for its high fertility.Although Hu sheep belong to the Mongolian group,their demographic history and genetic architecture remain inconclusive.He...
关键词：Hu sheep Population sequencing Demographic history Structural variation Genome-wide association study 
Medicago2035:Genomes,functional genomics,and molecular breeding
《Molecular Plant》2025年第2期219-244,共26页Qinyi Ye Chuanen Zhou Hao Lin Dong Luo Divya Jain Maofeng Chai Zhichao Lu Zhipeng Liu Sonali Roy Jiangli Dong Zeng-Yu Wang Tao Wang 
supported by the National Key Research and Development Program of China(2023YFF1001400 to T.W.);the Young Elite Scientists Sponsorship Program by CAST(2023QNRC001 to Q.Y.);the National Natural Science Foundation of China(32370253 to J.D.,32325035 to H.L.);the US Department of Agriculture(USDA)US National Institute of Food and Agriculture(NIFA)grant(2022-38821-37353 to S.R.),and a US National Science Foundation Award(2217830 to S.R.).
Medicago,a genus in the Leguminosae or Fabaceae family,includes the most globally significant forage crops,notably alfalfa(Medicago sativa).Its close diploid relative Medicago truncatula serves as an exemplary model p...
关键词：MEDICAGO ALFALFA legume model functional genomics nodule symbiosis molecular breeding 
Ancient genomes shed light on the long-term genetic stability in the Central Plain of China
《Science Bulletin》2025年第3期333-337,共5页Hao Ma Yawei Zhou Rui Wang Fei Yan Haodong Chen Limin Qiu Jing Zhao Li Jin Chuan-Chao Wang 
supported by the National Social Science Foundation of China(21&ZD285).
The Central Plain of China,or Zhongyuan(中原),refers to a part of the North China Plain surrounding the middle and lower reaches of the Yellow River(YR),with Henan Province as the center.Rich archaeological records su...
关键词：CENTRAL CENTERS ANCIENT 
Pear genomes display significant genetic diversity and provide novel insights into the fruit quality traits differentiation
《Horticultural Plant Journal》2024年第6期1274-1290,共17页Baopeng Ding Haifei Hu Yunpeng Cao Ruirui Xu Yujing Lin Tahir ul Qamar Muhammad Yuqin Song Guangqi He Youzhi Han Huangping Guo Jun Qiao Jianguo Zhao Xinxin Feng Sheng Yang Xuhu Guo Rajeev Kumar Varshney Liulin Li 
supported by the National Natural Science Foundation of China(Grant No.32102364);the General Program of Shandong Natural Science Foundation(Grant No.ZR2022MC064);the Shanxi Province Postdoctoral Research Activity Fund(Grant No.K462101001);the Doctoral Research Initiation Fund of Shanxi Datong University(Grant No.2023-B-15);the Earmarked Fund for Modern Agro-industry Technology Research System(Grant No.2023CYJSTX07);the Shanxi Province Excellent Doctoral Work Award Project(Grant No.606-02010609)。
The pear(Pyrus spp.)is well known for diverse flavors,textures,and global horticultural importance.However,the genetic diversity responsible for its extensive phenotypic variations remains largely unexplored.Here,we d...
关键词：PEAR Phased diploid genome Pangenome PAV Fruit quality 
The evolutionary tale of lilies:Giant genomes derived from transposon insertions and polyploidization被引量：1
《The Innovation》2024年第6期41-43,共3页Sujuan Xu Runzhou Chen Xinqi Zhang Yufeng Wu Liuyan Yang Zongyi Sun Zhitao Zhu Aiping Song Ze Wu Ting Li Biao Jin Shihui Niu Xin-Cheng Huang Si-Jie Liu Cheng-Ao Yang Guixia Jia Yanhong He Fang Du Minmin Chen Fei Chen Wenhe Wang Hongmei Sun Yongyao Fu Weibiao Liao Huaidi Pei Xuewei Wu Sixiang Zheng Jia-Yu Xue Guogui Ning Ray Ming Nianjun Teng 
supported by the National Key R&D Program of China(grant no.2019YFD1000400);the“JBGS”Project of Seed Industry Revitalization in Jiangsu Province(JBGS[2021]093);the Project for Crop Germplasm Resources Conservation of Jiangsu Province(grant no.2021-SJ-011);the Seed Industry Innovation Project(2021NK1005)from the Department of Science and Technology of Hunan Province;the High-level Key Discipline Construction Project for Traditional Chinese Medicine-Resources Science of Chinese Medicinal Materials from National Administration of Traditional Chinese Medicine;the Fundamental Research Funds for the Central Universities from Nanjing Agricultural University;the Pilot Incubation Project of Modern Flower and Horticultural Industry Technology from Nanjing Oriole Island Modern Agricultural Development Co.,Ltd;This work was supported by the high-performance computing platformof Bioinformatics Center,Nanjing Agricultural University.
Dear Editor,Lily(Lilium spp.),known as the“king of bulbous flowers,”has high ornamental and medicinal value due to its attractive,fragrant flowers and nutritious bulbs.The Lilium genus comprises approximately 115 pe...
关键词：spp flowers insertion 
The demic diffusion of Han culture into the Yunnan-Guizhou plateau inferred from ancient genomes
《National Science Review》2024年第12期78-82,共5页Kongyang Zhu Changguo Hu Meiqing Yang Xinglong Zhang Jianxin Guo Mingxia Xie Xiaomin Yang Hao Ma Rui Wang Jing Zhao Le Tao Haifeng He Wen Wan Qun Zhang Li Jin Yunjie Zuo Bisu Zhou Jiang Huang Chuan-Chao Wang 
funded by the National Natural Science Foundation of China(T2425014,32270667,82260335,and 82460336);Natural Science Foundation of Fujian Province of China(2023J06013);National Social Science Foundation of China(21&ZD285);Open Research Fund of State Key Laboratory of Genetic Engineering at Fudan University(SKLGE-2310);Guizhou Scientific Support Project(Qian Science Support[2021]General 448);Guizhou‘Hundred’High-level Innovative Talent Project(Qian Science Platform Talents[2020]6012-2);Guizhou Philosophy and Social Science Planning Project(23GZYB88);Guizhou Medical University Doctor Foundation(QianJ-2022-PHD-078);Guizhou Scientific Basic Research Project(Qian Science Basic[2024]Youth 227,[2024]Youth 240);Major Special Project of Philosophy and Social Sciences Research of the Ministry of Education(2022JZDZ023);Major Project of National Social Science Foundation of China(2021MZD014);Open Research Fund of Forensic Genetics Key Laboratory of the Ministry of Public Security(2023FGKFKT07);National Key Research and Development Program of China(2023YFC3303701-02).
According to the historical records of Records of the Grand Historian(史记)and genomic evidence,the Han Chinese could trace their ancestry back to the Huaxia tribe,people who lived along the Yellow River basin since N...
关键词：SINCE GUIZHOU CULTURE 
GENOMES UNCOUPLED PROTEIN1 binds to plastid RNAs and promotes their maturation
《Plant Communications》2024年第12期73-90,共18页Qian Tang Duorong Xu Benjamin Lenzen Andreas Brachmann Madhura MYapa Paymon Doroodian Christian Schmitz-Linneweber Tatsuru Masuda Zhihua Hua Dario Leister Tatjana Kleine 
Deutsche Forschungsgemeinschaft to C.S.-L.,D.L.,and T.K.(TRR175,projects A02,C01,and C05);Research in the Hua laboratory was supported by a US NSF CAREER award(MCB-1750361).
Plastid biogenesis and the coordination of plastid and nuclear genome expression through anterograde and retrograde signaling are essential for plant development.GENOMES UNCOUPLED1(GUN1)plays a central role in retrogr...
关键词：GUN1 MORF2 plastid(post)transcriptome retrograde signaling RIP-seq RNA binding protein 
Phylogeny of Seven Genomes of Monkeypox Virus—Anhui Province,China,2023
《China CDC weekly》2024年第46期1218-1222,共5页Wanhang Lu Qingqing Chen Xiaomin Wu Jiaqi Li Ming Li Yongkang Xiao Lei Gong Yong Sun 
Supported by the Scientific Research Projects of the Health Commission of Anhui Province in 2022(AHWJ2022b016);the Scientific Research Projects of Health Commission of Anhui Province in 2022(AHWJ2022b030).
What is already known about this topic?Monkeypox,first identified in Africa in 1958,is a zoonotic disease caused by monkeypox virus(MPXV).Since January 2022,a global outbreak of mpox has spread to over 100 non-endemic...
关键词：ANHUI branch CHAINS 
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