GENOMIC

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Identification and transferring of a new Fusarium head blight resistance gene FhbRc2 from Roegneria ciliaris 3ScL chromosome arm into common wheat
《The Crop Journal》2024年第6期1718-1726,共9页Rongrong Song Danhua Zhang Jingxin Yang Yifan Cheng Xinying Song Weiping Zhao Mengshuang Xia Yao Zhang Luyang Wei Menghao Cheng Wei Wang Li Sun Haiyan Wang Xiu’e Wang Jin Xiao 
supported by Science and Technology Innovation 2030-Major Project (2023ZD04025);the Fundamental Research Funds for the Central Universities (XUEKEN2022012,YDZX202301);Zhongshan Biological Breeding Laboratory (ZSBBL)ZSBBL-KY2023-02-2,Jiangsu Provincial Key Research and Development Program (BE2022346,BE2021375);Seed Industry Revitalization Project of Jiangsu Province (JBGS (2021)006,JBGS (2021)013 and JBGS (2021)047);the Joint Research of Improved Wheat Variety of Anhui,the Key Research and the Jiangsu Agricultural Technology System (JATS) ([2023]422);Natural Science Foundation of Shanghai (22ZR1444900).
Fusarium head blight(FHB)threatens wheat production worldwide.Utilization of FHB resistant varieties is the most effective solution for disease control.Owing to the limited sources of FHB resistance,mining of novel re...
关键词：Triticum aestivum L. Fusarium head blight Roegneria ciliaris Genomic/Fluorescence in situ hybridization Alien chromosome lines 
Leveraging the potential of big genomic and phenotypic data for genome-wide association mapping in wheat
《The Crop Journal》2024年第3期803-813,共11页Moritz Lell Yusheng Zhao Jochen C.Reif 
funding within the Wheat BigData Project(German Federal Ministry of Food and Agriculture,FKZ2818408B18)。
Genome-wide association mapping studies(GWAS)based on Big Data are a potential approach to improve marker-assisted selection in plant breeding.The number of available phenotypic and genomic data sets in which medium-s...
关键词：Big Data Genome-wide association study Data integration Genomic prediction WHEAT 
Identification of new cotton fiber-quality QTL by multiple genomic analyses and development of markers for genomic breeding
《The Crop Journal》2024年第3期866-879,共14页Haozhe Tan Binghui Tang Mengling Sun Qiulu Yin Yizan Ma Jianying Li Pengcheng Wang Zhonghua Li Guannan Zhao Maojun Wang Xianlong Zhang Chunyuan You Lili Tu 
supported by National Key Research and Development Program of China(2022YFF1001400);the National Natural Science Foundation of China(31830062 and 32172071);Innovation and Application of Superior Crop Germplasm Resources of Shihezi(2021NY01);Breeding of New Cotton Varieties and Application of Transgenic Breeding Technology(2022NY01)。
Cotton fiber is one of the main raw materials for the textile industry.In recent years,many cotton fiber quality QTL have been identified,but few were applied in breeding.In this study,a genome wide association study(...
关键词：Cotton fiber quality breeding GWAS Genome-wide selective sweep analysis Genomic selection InDel markers 
Genome-wide association mapping and genomic prediction of stalk rot in two mid-altitude tropical maize populations
《The Crop Journal》2024年第2期558-568,共11页Junqiao Song Angela Pacheco Amos Alakonya Andrea S.Cruz-Morales Carlos Muoz-Zavala Jingtao Qu Chunping Wang Xuecai Zhang Felix San Vicente Thanda Dhliwayo 
funded by the CGIAR Research Program(CRP)on MAIZE;the USAID through the Accelerating Genetic Gains Supplemental Project(Amend.No.9 MTO 069033),and the One CGIAR Initiative on Accelerated Breeding;funding from the governments of Australia,Belgium,Canada,China,France,India,Japan,the Republic of Korea,Mexico,the Netherlands,New Zealand,Norway,Sweden,Switzerland,the United Kingdom,the United States,and the World Bank;supported by the China Scholarship Council。
Maize stalk rot reduces grain yield and quality.Information about the genetics of resistance to maize stalk rot could help breeders design effective breeding strategies for the trait.Genomic prediction may be a more e...
关键词：Maize stalk rot Genome-wide association mapping Haplotype analysis Genomic prediction G×E interaction 
Genome assembly of KA105,a new resource for maize molecular breeding and genomic research被引量：1
《The Crop Journal》2023年第6期1793-1804,共12页Ting Li Shutu Xu Jiawen Zhao Yapeng Wang Jun Zhang Xin Wei Jianzhou Qu Ruisu Yu Xinghua Zhang Chuang Ma Jiquan Xue 
the China Agriculture Research System(CARS-02-77);the Shaanxi Province Research and Development Project(2021LLRH-07);the Yangling Seed Industry Innovation Center Project(YLZY-YM-01).
Superior inbred lines are central to maize breeding as sources of natural variation.Although many elite lines have been sequenced,less sequencing attention has been paid to newly developed lines.We constructed a genom...
关键词：Genome assembly Pedigree analysis Structural variation Transcriptome atlas Differential network 
Genomic prediction of yield performance among single-cross maize hybrids using a partial diallel cross design
《The Crop Journal》2023年第6期1884-1892,共9页Ping Luo Houwen Wang Zhiyong Ni Ruisi Yang Fei Wang Hongjun Yong Lin Zhang Zhiqiang Zhou Wei Song Mingshun Li Jie Yang Jianfeng Weng Zhaodong Meng Degui Zhang Jienan Han Yong Chen Runze Zhang Liwei Wang Meng Zhao Wenwei Gao Xiaoyu Chen Wenjie Li Zhuanfang Hao Junjie Fu Xuecai Zhang Xinhai Li 
the National Natural Science Foundation of China(32272049,32261143757);Sustainable Development International Cooperation Program from Bill&Melinda Gates Foundation(2022YFAG1002);the National Key Research and Development Program of China(2020YFE0202300);the Agricultural Science&Technology Innovation Program(CAASZDRW202109);the China Scholarship Council.
Genomic prediction(GP)in plant breeding has the potential to predict and identify the best-performing hybrids based on the genotypes of their parental lines.In a GP experiment,34 elite inbred lines were selected to ma...
关键词：MAIZE Genomic prediction Prediction model Genetic effects Hybrid performance 
Surveying the genomic landscape of silage-quality traits in maize(Zea mays L.)
《The Crop Journal》2023年第6期1893-1901,共9页Jatin Sharma Shubham Sharma Krishna Sai Karnatam Om Prakash Raigar Chayanika Lahkar Dinesh Kumar Saini Sushil Kumar Alla Singh Abhijit Kumar Das Priti Sharma Ramesh Kumar 
Despite the longstanding importance of silage as a critical feed source for ruminants,its quality improvement has been largely overlooked.Although numerous quantitative trait loci(QTL)and genes affecting silage qualit...
关键词：Meta-QTL Silage quality MAIZE GWAS Candidate genes 
Genomic location of Gb1, a unique gene conferring wheat resistance to greenbug biotype F
《The Crop Journal》2023年第5期1595-1599,共5页Xiangyang Xu Genqiao Li Guihua Bai Brett FCarver Ruolin Bian Amy Bernardo JScott Armstrong 
supported by the USDA ARS CRIS Project (3072– 21000–009–00D)。
Greenbug(Schizaphis graminum, Rondani) is a serious insect pest in many wheat growing regions and has been infesting cereal crops in the USA for over a century. Continuous occurrence of new greenbug biotypes makes it ...
关键词：Wheat Greenbug resistance gene Gb1 KASP markers Linkage analysis Genotyping-by-sequencing 
Comparison of sequencing-based and array-based genotyping platforms for genomic prediction of maize hybrid performance被引量：1
《The Crop Journal》2023年第2期490-498,共9页Guangning Yu Yanru Cui Yuxin Jiao Kai Zhou Xin Wang Wenyan Yang Yiyi Xu Kun Yang Xuecai Zhang Pengcheng Li Zefeng Yang Yang Xu Chenwu Xu 
supported by grants from the National Natural Science Foundation of China(32061143030,32170636,32100448);the Key Research and Development Program of Jiangsu Province(BE2022343);the Seed Industry Revitalization Project of Jiangsu Province(JBGS[2021]009);Project of Hainan Yazhou Bay Seed Lab(B21HJ0223);the State Key Laboratory of North China Crop Improvement and Regulation(NCCIR2021KF-5,NCCIR2021ZZ-4);Jiangsu Province Agricultural Science and Technology Independent Innovation(CX(21)1003);the Independent Scientific Research Project of the Jiangsu Key Laboratory of Crop Genomics and Molecular Breeding(PLR202102);the Open Funds of the Jiangsu Key Laboratory of Crop Genomics and Molecular Breeding(PL202005);Yangzhou University High-end Talent Support Program,and the Priority Academic Program Development of Jiangsu Higher Education Institutions(PAPD).
Genomic selection(GS)is a powerful tool for improving genetic gain in maize breeding.However,its routine application in large-scale breeding pipelines is limited by the high cost of genotyping platforms.Although seque...
关键词：Genomic selection Maize GBS SNP array Marker density 
Development of a target capture sequencing SNP genotyping platform for genetic analysis and genomic breeding in rapeseed被引量：4
《The Crop Journal》2023年第2期499-510,共12页Xiaodong Li Xumei Liu Yonghai Fan Shengting Li Mengna Yu Mingchao Qian Yuling Chen Hongqiao Chen Xinchun Li Bei Liu Xinfu Xu Cunmin Qu Jiana Li Kun Lu 
supported by the National Natural Science Foundation of China(31871653 to K.L.,31830067 to J.L.);the Talent Project of Chongqing Natural Science Foundation(cstc2021ycjhbgzxm0033 to K.L.);Germplasm Creation Special Program of Southwest University.
Rapeseed(Brassica napus)is an oil crop grown worldwide,making it a key plant species in molecular breeding research.However,the complexity of its polyploid genome increases sequencing costs and reduces sequencing accu...
关键词：RAPESEED Target capture SNP genotyping platform Genomic breeding 
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