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The complete mitochondrial genome of Triuncina daii(Lepidoptera:Bombycidae) and its phylogenetic implications被引量:1
《Entomotaxonomia》2017年第3期223-237,共15页Yipei ZHAO Xingshi GU Gefeng REN Xing WANG 
supported by the National Natural Science Foundation of China(31100482,31411140034);the Scientific Research Fund of Hunan Provincial Education Department(16B119)
The bombycid moth, Triuncina daii Xing Wang & Zolotuhin, 2015, plays an important role for analyzing the phylogenetic relationships of the family Bombycidae (Lepidoptera: Bombycoidea). Here we first describe the c...
关键词:MITOGENOME Protein-coding genes cytochrome c oxidase subunit I (coxl) Nucleotidecomposition 
A Modified Statistically Optimal Null Filter Method for Recognizing Protein-coding Regions被引量:1
《Genomics, Proteomics & Bioinformatics》2012年第3期166-173,共8页Lei Zhang Fengchun Tian Shiyuan Wang 
supported by the Fundamental Research Funds for the Central Universities (Grant No.CDJXS10160001);the Central University Postgradu-ate’ Science and Innovation Funds of China (Grant No.CDJXS12160005)
Computer-aided protein-coding gene prediction in uncharacterized genomic DNA sequences is one of the most important issues of bio- logical signal processing. A modified filter method based on a statistically optimal n...
关键词:Gene prediction Biological signal processing Protein-coding region Square deviation gain 
A multirate DSP structure for the identification of protein-coding regions
《International Journal of Biomathematics》2017年第8期125-139,共15页Malaya Kumar Hota Vinay Kumar Srivastava 
The identification of protein-coding regions in DNA sequence using digital signal process- ing methods is one of the central issues in bioinformatics. In this paper, a multirate struc- ture is proposed for the identif...
关键词:BIOINFORMATICS protein-coding regions multirate structure polyphase decom-position period-3 property. 
Hide and Seek: Protein-coding Sequences Inside ‘‘Non-coding” RNAs被引量:2
《Genomics, Proteomics & Bioinformatics》2016年第4期179-180,共2页Daniel Oehler Jan Haas 
supported by the German Centre for Cardiovascular Research (DZHK) and the German Ministry of Education and Research (BMBF)
Calcium homeostasis is crucial for muscle contractilityMuscle cells are critically dependent on calcium homeostasis. Without having the right amount of calcium ions just on the spot and coordinated in between muscle c...
关键词:SERCA RNAs Hide and Seek NON-CODING Protein-coding Sequences Inside 
Computational prediction of over-annotated protein-coding genes in the genome of Agrobacterium tumefaciens strain C58被引量:1
《Chinese Physics B》2015年第12期98-104,共7页于家峰 隋天翔 王红梅 王春玲 荆莉 王吉华 
Project supported by the National Natural Science Foundation of China(Grant Nos.61302186 and 61271378);the Funding from the State Key Laboratory of Bioelectronics of Southeast University
Agrobacterium tumefaciens strain C58 is a type of pathogen that can cause tumors in some dicotyledonous plants.Ever since the genome of A. tumefaciens strain C58 was sequenced, the quality of annotation of its protein...
关键词:Agrobacterium tumefaciens strain C58 protein-coding gene genome re-annotation graphical representation 
Transcriptome analysis in the beet webworm, Spoladea recurvalis (Lepidoptera: Crambidae)被引量:2
《Insect Science》2018年第1期33-44,共12页Jian-Cheng Chang Srinivasan Ramasamy 
The beet webworm, Spoladea recurvalis Fabricius, is a destructive pest on vegetable crops in tropics and subtropics; its main host plant is amaranth. It has become imperative to develop non-chemical methods to control...
关键词:PHEROMONE protein-coding genes putative genes Spoladea recurvalis TRANSCRIPTOME 
基于机器学习方法预测环形RNA编码蛋白的潜能
《云南民族大学学报(自然科学版)》2020年第5期464-471,485,共9页王琮 赵健 刘晶晶 宋晓峰 
国家自然科学基金(61973155;61571223)。
环形RNA是一类广泛存在于真核细胞中的内源性RNA分子,没有5’末端帽子和3’末端polyA尾巴,以共价键连接形成封闭环状结构.一直以来,环形RNA被认为是一类不能翻译的非编码RNA.然而近年来有研究报道,环形RNA能够编码蛋白质从而调控重要的...
关键词:环形RNA 编码蛋白 机器学习 
Identification of Protein-Coding Regions in DNA Sequences Using A Time-Frequency Filtering Approach被引量:4
《Genomics, Proteomics & Bioinformatics》2011年第1期45-55,共11页Sitanshu Sekhar Sahu Ganapati Panda 
Accurate identification of protein-coding regions (exons) in DNA sequences has been a challenging task in bioinformatics. Particularly the coding regions have a 3-base periodicity, which forms the basis of all exon ...
关键词:protein-coding region 3-base periodicity time-frequency filtering S-TRANSFORM 
Coding circular RNA in human cancer
《Genes & Diseases》2025年第3期194-204,共11页Yuan Lin Yawen Wang Lixin Li Kai Zhang 
supported by the National Natural Science Foundation of China(No.81802406);Shandong Provincial Natural Science Foundation of China(No.ZR2021MH045,ZR2020LZL009,ZR2019BH061,ZR2021MH225);Special Funds for Scientific Research on Breast Diseases of Shandong Medical Association of China(No.YXH2021ZX058).
circular RNA (circRNA) is a covalently closed single-stranded RNA that lacks 5’ and 3’ends and has long been considered a noncoding RNA. With the development of high-throughputsequencing and bioinformatics technolog...
关键词:Cancer Cap-independent Circular RNA Protein-coding circRNA TRANSLATION 
Protein-coding genes combined with long noncoding RNA as a novel transcriptome molecular staging model to predict the survival of patients with esophageal squamous cell carcinoma被引量:4
《Cancer Communications》2018年第1期50-62,共13页Jin-Cheng Guo Yang Wu Yang Chen Feng Pan Zhi-Yong Wu Jia-Sheng Zhang Jian-Yi Wu Xiu-E Xu Jian-Mei Zhao En-Min Li Yi Zhao Li-Yan Xu 
supported by the Natural Science Foundation of China-Guangdong Joint Fund(Grant Numbers U1301227,U0932001);the National Natural Science Foundation of China(Grant Numbers 81360331,81472613,81572341);the Science&Technology Planning Project of Guangdong Province(Grant Number 2014A030304060);the Department of Education,Guangdong Government under the Top-tier University Development Scheme for Research and Control of Infectious Diseases.
Background:Esophageal squamous cell carcinoma(ESCC)is the predominant subtype of esophageal carcinoma in China.This study was to develop a staging model to predict outcomes of patients with ESCC.Methods:Using Cox regr...
关键词:Long non-coding RNA Protein-coding gene Esophageal squamous cell carcinoma Overall survival Staging model TRANSCRIPTOME 
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