云南高校图书馆联盟文献共享服务平台- SHOTGUN

SHOTGUN: 作品数：44被引量：77H指数：5; 导出分析报告; 相关领域：医药卫生农业科学更多>>; 相关作者：杨小迪陈兴智张慧吴琦陶志勇更多>>; 相关机构：华南农业大学吉林大学内蒙古农业大学承德医学院更多>>; 相关期刊：更多>>; 相关基金：国家自然科学基金国家重点基础研究发展计划内蒙古自治区自然科学基金江苏省“青蓝工程”基金更多>>

Shotgun crystal structure prediction using machine-learned formation energies: 《npj Computational Materials》2024年第1期13-26,共14页Liu Chang Hiromasa Tamaki Tomoyasu Yokoyama Kensuke Wakasugi Satoshi Yotsuhashi Minoru Kusaba Artem R.Oganov Ryo Yoshida; supported in part by a Ministry of Education,Culture,Sports,Science and Technology(MEXT)KAKENHI Grant-in-Aid for Scientific Research on Innovative Areas(grant number 19H05820);Japan Society for the Promotion of Science(JSPS)Grants-in-Aid for Scientific Research(A)(grant number 19H01132);Early-Career Scientists(grant number 23K16955);JST CREST(grant numbers JPMJCR19I3,JPMJCR22O3,and JPMJCR2332);Computational resources were partly provided by the supercomputer at the Research Center for Computational Science,Okazaki,Japan(projects 23-IMSC113 and 24-IMS-C107).; Stable or metastable crystal structures of assembled atoms can be predicted by finding the global or local minima of the energy surface within a broad space of atomic configurations.Generally,this requires repeated fi...; 关键词：CRYSTAL STRUCTURE CRYSTALLINE

High Sensitivity of Shotgun Metagenomic Sequencing in Colon Tissue Biopsy by Host DNA Depletion被引量：1: 《Genomics, Proteomics & Bioinformatics》2023年第6期1195-1205,共11页Wing Yin Cheng Wei-Xin Liu Yanqiang Ding Guoping Wang Yu Shi Eagle S.H.Chu Sunny Wong Joseph J.Y.Sung Jun Yu; supported by the National Key R&D Program of China(Grant Nos.2020YFA0509200 and 2020YFA0509203);the RGC Theme-based Res Scheme Hong Kong,China(Grant No.T21-705/20-N);the RGC Collaborative Research Fund,China(Grant Nos.C4039-19GF and C7065-18GF);the RGC-GRF Hong Kong,China(Grant No.14163817);the Vice-Chancellor’s Discretionary Fund Chinese University of Hong Kong,China.; The high host genetic background of tissue biopsies hinders the application of shotgun metagenomic sequencing in characterizing the tissue microbiota.We proposed an optimized method that removed host DNA from colon bi...; 关键词：Gut microbiota Colon tissue Host DNAdepletion Shotgun metagenomic sequencing

Culture-independent assessment of probiotic supplement consistency in commercially available probiotic supplements: 《Food Bioscience》2023年第3期2118-2125,共8页Aycan Gundogdu O.Ufuk Nalbantoglu Ilknur Sarikaya Gizem Karis Meryem N.Erdogan Mehmet Hora Varol Tunali; The probiotic products market has experienced significant growth in recent years,driven by increasing consumer demand for health benefits.This demand is largely fueled by the widespread promotion of probiotic products...; 关键词：Probiotic products Shotgun metagenome sequencing Antibiotic-resistance genes Label discrepancies

Genomic sequencing in Colombian coffee fermentation reveals new records of yeast species: 《Food Bioscience》2023年第2期522-531,共10页Rosmery Cruz-O’Byrne Angie Gamez-Guzman Nelson Piraneque-Gambasica Sonia Aguirre-Forero a; The post-harvest processing of coffee plays a crucial role in developing high-quality beverages with differential sensory attributes.The present study aims to determine the yeast diversity associated with spontaneous ...; 关键词：Wet processing Shotgun metagenomics Kazachstania humilis Green coffee Sugars Cup quality

Tension-reduced closure of large abdominal wall defect caused by shotgun wound:A case report: 《World Journal of Clinical Cases》2022年第29期10713-10720,共8页Yan Li Jia-Hua Xing Zheng Yang Yu-Jian Xu Xiang-Ye Yin Yuan Chi Yi-Chi Xu Yu-Di Han You-Bai Chen Yan Han; BACKGROUND Large abdominal wall defect(LAWD)caused by shotgun wound is rarely reported.CASE SUMMARY Herein,we describe a case of LAWD caused by a gunshot wound in which the abdominal wall was reconstructed in stages,i...; 关键词：Free flap SHOTGUN HERNIA Large abdominal wall defect Tension relief closure Mesh Case report

Seasonal variations in the composition and functional profiles of gut microbiota reflect dietary changes in plateau pikas被引量：7: 《Integrative Zoology》2022年第3期379-395,共17页Chao FAN Liangzhi ZHANG Shangang JIA Xianjiang TANG Haibo FU Wenjing LI Chuanfa LIU He ZHANG Qi CHENG Yanming ZHANG; supported by the Grant from CAS No.152111KYSB20160089;Qinghai innovation platform construction project by Chinese Academy of Sciences(2021-ZJ-Y01);the project of western light for interdisciplinary team;Science and Technology Department of Qinghai Province Major Project“Sanjiangyaun National Park Animal Genome Program”;the Natural Science Foundation of Qinghai Province(2019-ZJ-7024).; Seasonal variations in gut microbiota of small mammals and how they are influenced by environmental variables are relatively poorly understood.We sampled 162 wild plateau pikas(Ochotona curzoniae)in 4 seasons over 2 a...; 关键词：16S rRNA gene gut microbiota plateau pikas(Ochotona curzoniae) seasonal variation shotgun metagenomic sequencing

Nuclear and chloroplast genome diversity revealed by low-coverage whole-genome shotgun sequence in 44 Brassica oleracea breeding lines被引量：2: 《Horticultural Plant Journal》2021年第6期539-551,共13页Sampath Perumal Nomar Espinosa Waminal Jonghoon Lee Hyun-Jin Koo Boem-soon Choi Jee Young Park Kyounggu Ahn Tae-Jin Yang; Golden Seed Project(Center for Horticultural Seed Development,Grant No.213003-04-1-SB430);Ministry of Agriculture,Food and Rural Affairs(MAFRA);Ministry of Oceans and Fisheries(MOF);“Cooperative Research Program for Agriculture Science&Technology Development(Grant No.PJ013238)”Rural Development Administration,Republic of Korea。; Whole-genome shogun sequence(WGS)data generated by next-generation sequencing(NGS)platforms are a valuable resource for crop improvement.We produced 5–6×WGS coverage of 44 Brassica oleracea breeding lines representi...; 关键词：Brassica oleracea subspecies Chloroplast genome Nuclear ribosomal DNA Genetic diversity PHYLOGENY

基于nano LC-Q-Exactive-MS/MS技术分析阿胶中的蛋白多肽类物质被引量：10: 《中国中药杂志》2021年第24期6422-6434,共13页褚夏燕孙梦茹贾贵华王延涛顾建军刘海滨葛广波; 泰山产业领军人才项目(TSCY20180234);国家重点研发计划“中医药现代化研究”重点专项(2017YFC1700200,2017YFC1702000);山东省重点研发计划重大科技创新工程项目(2019JZZY020907)。; 基于鸟枪法(shotgun)蛋白质组学分析技术对东阿阿胶成品中的蛋白多肽类物质进行系统分析。采用高pH反相色谱预分离的方法对酶解后的阿胶蛋白多肽类物质进行分级;采用Thermo Scientific EASY column预柱(100μm×2 cm,5μm,C_(18))及Ther...; 关键词：阿胶蛋白多肽类美拉德修饰多肽高pH反相分级 shotgun蛋白组分析

Cervicovaginal microbiome dynamics after taking oral probiotics被引量：3: 《Journal of Genetics and Genomics》2021年第8期716-726,共11页Chen Chen Lilan Hao Zhe Zhang Liu Tian Xiaowei Zhang Jie Zhu Zhuye Jie Xin Tong Liang Xiao Tao Zhang Xin Jin Xun Xu Huanming Yang Jian Wang Karsten Kristiansen Huijue Jia; The vaginal microbiota is less complex than the gut microbiota,and the colonization of Lactobacillus in the female vagina is considered to be critical for reproductive health.Oral probiotics have been suggested as pro...; 关键词：Oral probiotics Cervicovaginal microbiome Shotgun metagenomic data

Identification of zinc-binding peptides in ADAM17-inhibiting whey protein hydrolysates using IMAC-Zn^(2+) coupled with shotgun peptidomics被引量：1: 《Food Production, Processing and Nutrition》2021年第1期70-79,共10页M.Chinonye Udechukwu Chi Dang Chibuike C.Udenigwe; supported by the Natural Sciences and Engineering Research Council of Canada(NSERC)Discovery Grants(RGPIN-435865-2013 and RGPIN-2018-06839);Canada Foundation for Innovation(CFI)John R.Evans Leaders Fund Infrastructure Grant(Project number:31305).; Food components possessing zinc ligands can be used to inhibit zinc-dependent enzymes.In this study,zinc-binding peptides were derived from whey protein hydrolysates,and their ultrafiltration(>1 and<1 kDa)fractions,pr...; 关键词：ZINC Zinc ligands Food protein Bioactive peptides Immobilized metal affinity chromatography Ultrafiltration ADAM17 PEPTIDOMICS Bioinformatics

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