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作品数：15被引量：15H指数：2
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相关作者：刘宏德袁志栋更多>>
相关机构：东南大学湖南科技大学更多>>
相关期刊：《Open Journal of Orthopedics》《Open Journal of Genetics》《Genomics, Proteomics & Bioinformatics》《Horticultural Plant Journal》更多>>
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Rice-wheat comparative genomics:Gains and gaps
《The Crop Journal》2024年第3期656-669,共14页Akila Wijerathna-Yapa Ruchi Bishnoi Buddhini Ranawaka Manu Maya Magar Hafeez Ur Rehman Swati G.Bharad Michal T.Lorenc Vinita Ramtekey Sasha Gohar Charu Lata Md.Harun-Or-Rashid Maryam Razzaq Muhammad Sajjad Bhoja R.Basnet 
Rice and wheat provide nearly 40%of human calorie and protein requirements.They share a common ancestor and belong to the Poaceae(grass)family.Characterizing their genetic homology is crucial for developing new cultiv...
关键词：Comparative genomics ORTHOLOGS GENES SYNTENY Genetic engineering Molecular breeding 
Genome-wide identification and expression profiling of photosystem II(PsbX)gene family in upland cotton(Gossypium hirsutum L.)
《Journal of Cotton Research》2024年第1期1-14,共14页RAZA Irum PARVEEN Abida AHMAD Adeel HU Daowu PAN Zhaoe ALI Imran DU Xiongming 
supported by National Natural Science Foundation of China(32060466);Chinese Academy of Agricultural Sciences。
Background Photosystem II(PSII)constitutes an intricate assembly of protein pigments,featuring extrinsic and intrinsic polypeptides within the photosynthetic membrane.The low-molecular-weight transmembrane protein Psb...
关键词：PHOTOSYSTEM PHYLOGENETIC SYNTENY RNA seq Gene expression Orthologous 
GenomeSyn:a bioinformatics tool for visualizing genome synteny and structural variations被引量：6
《Journal of Genetics and Genomics》2022年第12期1174-1176,共3页Zu-Wen Zhou Zhi-Guang Yu Xiao-Ming Huang Jin-Shen Liu Yi-Xiong Guo Ling-Ling Chen Jia-Ming Song 
supported by the National Natural Science Foundation of China(32100526,31871269);Hubei Provincial Natural Science Foundation of China(2019CFA014);Innovation Project of Guangxi Graduate Education(YCSW2022038);the starting research grant for High-level Talents from Guangxi University。
Advances in the next-generation and long-read sequencing technologies have promoted the development of genome-wide comparative genomics analysis,and constructing pangenomes and identifying structural variations(SVs)ar...
关键词：TRAITS GENOME STRUCTURAL 
Gene capture by transposable elements leads to epigenetic conflict in maize
《Molecular Plant》2021年第2期237-252,共16页Aline Muyle Danelle Seymour Nikos Darzentas Elias Primetis Brandon S.Gaut Alexandros Bousios 
A.M.is supported by an EMBO Postdoctoral Fellowship ALTF 775-2017 and by HFSPO Fellowship LT000496/2018-L;D.K.S.is supported by a Postdoctoral Fellowship from the National Science Foundation(NSF)Plant Genome Research Program(1609024);B.S.G.is supported by an NSF grant 1655808;A.B.is supported by The Royal Society(award nos.UF160222 and RGF/R1/180006).
Transposable elements(TEs)regularly capture fragments of genes.When the host silences these TEs,siRNAs homologous to the captured regions may also target the genes.This epigenetic crosstalk establishes an intragenomic...
关键词：transposable elements intragenomic conflict gene capture epigenetic silencing METHYLATION SYNTENY 
Identification and characterization of BoPUB3: a novel interaction protein with S-locus receptor kinase in Brassica oleracea L.被引量：2
《Acta Biochimica et Biophysica Sinica》2019年第7期723-733,共11页Songmei Shi Qiguo Gao Tonghong Zuo Zhenze Lei Quanming Pu Yukui Wang Guixi Liu Xinhua He Xuesong Ren Liquan Zhu 
This work was supported by the grants from the National Natural Science Foundation of China (No.31572127);the Chongqing Natural Science Foundation (No.cstc2012jjB80010);the National Basic Research Program of China (No.2012CB113900);Chongqing Graduate Research and Innovation Project (No.CYS18085).
Armadillo repeat containing 1 (ARC1) is phosphorylated by S-locus receptor kinase (SRK) and functions as a positive regulator in self-incompatibility response of Brassica. However, ARC1 only causes partial breakdown o...
关键词：expression ANALYSIS gene cloning PROTEIN INTERACTION S-LOCUS receptor kinase SUBCELLULAR localization SYNTENY ANALYSIS 
Synteny search identifies carnivore Y chromosome for evolution of male specific genes被引量：1
《Integrative Zoology》2019年第3期224-234,共11页Huizhong FAN Yibo HU Lei SHAN Lijun YU Bing WANG Min LI Qi WU Fuwen WEI 
the funds of the National Natural Science Foundation of China(Nos.31821001,31822050,31270418 and 31470441).
The explosive accumulation of mammalian genomes has provided a valuable resource to characterize the evo­lution of the Y chromosome.Unexpectedly,the Y-chromosome sequence has been characterized in only a small handful...
关键词：carnivore species EVOLUTION male-specific region of Y chromosomes sex chromosome SYNTENY 
Genetic Linkage Map and Comparative Genome Analysis for the Atlantic Killifish (Fundulus heteroclitus)
《Open Journal of Genetics》2016年第1期28-38,共11页Eric R. Waits John Martinson Brian Rinner Stephen Morris Dina Proestou Denise Champlin Diane Nacci 
Genetic linkage maps are valuable tools in evolutionary biology;however, their availability for wild populations is extremely limited. Fundulus heteroclitus (Atlantic killifish) is a non-migratory estuarine fish that ...
关键词：Fundulus heteroclitus Genetic Linkage Map Synteny Analysis MICROSATELLITE Single Nucleotide Polymorphism (SNP) 
Evolution of TWIN SISTER of FT(TSF) Genes in Brassicaceae
《Horticultural Plant Journal》2016年第1期16-25,共10页HU Yunyan LIU Bo SUN Chao LIU Jing WANG Xiaobo CHENG Feng LIANG Jianli WANG Xiaowu WU Jian 
funded by the National High Technology R&D Program of China(2012AA100101);the National Program on Key Basic Research Projects of China(The 973 Program,2012CB113906);NSFC funding(31272179)
FT and its homolog, TWIN SISTER OF FT(TSF), act redundantly as integrators in flora transition pathways in Arabidopsis thaliana. The evolution of these key fl wering regulatory genes during Brassicaceae speciation has...
关键词：Brassicaceae FT TSF EVOLUTION CNS SYNTENY 
Characterization of the cyp19a1a gene from a BAC sequence in half-smooth tongue sole (Cynoglossus semilaevis) and analysis of its conservation among teleosts
《Acta Oceanologica Sinica》2013年第8期35-43,共9页SHAO Changwei LIU Geng LIU Shanshan LIU Changlin CHEN Songlin 
The National Nature Science Foundation of China under contract Nos 41006107, 31072202 and 31130057;the National High-Technology R&D Program of China (863 Program) under contract No. 2012AA10A403-2;the Special Fund for Agro-scientific Research in the Public Interest of China under contract No. 200903046;Taishan Scholar Project Fund of Shandong of China
The cyp19ala gene encodes an aromatase that plays a key role in sex differentiation of the gonad. The first bacterial artificial chromosome （BAC） sequence of half-smooth tongue sole （Cynoglossus sernilaeuis） conta...
关键词：BAC cypl9ala CONSERVATION gene synteny half-smooth tongue sole 
Genomic organization and sequence dynamics of the AvrPiz-t locus in Magnaporthe oryzae被引量：3
《Journal of Zhejiang University-Science B(Biomedicine & Biotechnology)》2012年第6期452-464,共13页Ping LI Bin BAI Hong-yan ZHANG Heng ZHOU Bo ZHOU 
Project supported by the National Natural Science Foundation of China (Nos.30700450 and 30971878);the Fundamental Research Funds for the Central Universities (No.2009QNA6024),China
Plants utilize multiple layers of defense mechanisms to fight against the invasion of diverse pathogens.The R gene mediates resistance,in most cases,dependent on the co-existence of its cognate pathogen-derived avirul...
关键词：Magnaporthe oryzae SYNTENY Transposon complex DYNAMICS Recombination 
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