GENOME-WIDE

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Genome-wide investigation and transcriptional profiling of the oxidosqualene cyclase (OSC) genes in wheat (Triticum aestivum)被引量：1
《Journal of Systematics and Evolution》2022年第6期1378-1392,共15页Chang-Feng Guo Xing-Chen Xiong Huan Dong Xiao-Quan Qi 
This work was supported by Funds for International Cooperation and Exchange of the National Natural Science Foundation of China(Grant Nos.31920103003 and 31530050);National Key Basic Research Program of China(973 Program)(Grant No.2011CB100700).
Triterpene scaffolds are cyclized by differential functional genes of the oxidosqualene cyclase (OSC) gene family, which are widely present in plant species. Thirty-nine OSCs were identified from the hexaploid bread w...
关键词：evolution gene family oxidosqualene cyclase TRITERPENE WHEAT 
Genome-wide identification of agronomically important genes in outcrossing crops using OutcrossSeq被引量：9
《Molecular Plant》2021年第4期556-570,共15页Mengjiao Chen Weijuan Fan Feiyang Ji Hua Hua Jie Liu Mengxiao Yan Qingguo Ma Jiongjiong Fan Qin Wang Shufeng Zhang Guiling Liu Zhe Sun Changgeng Tian Fengling Zhao Jianli Zheng Qi Zhang Jiaxin Chen Jie Qiu Xin Wei Ziru Chen Peng Zhang Dong Pei Jun Yang Xuehui Huang 
We are grateful to Prof.Lars M.Steinmetz for the Tn5 plasmid.This work was funded by the Ministry of Science and Technology of China(2016YFD0100902 to X.H.,2018YFD1000701 and 2019YFD1000703 to J.Y.);the National Natural Science Foundation of China(31825015 to X.H.);the Program of Shanghai Academic Research Leader(18XD1402900 to X.H.);the Innovation Program of the Shanghai Municipal Education Commission(2017-01-07-00-02-E00039 to X.H.);the Shanghai Municipal Afforestation&City Appearance and Environmental Sanitation Administration(G182402,G192413,G192414,and G202402 to J.Y.);the Youth Innovation Promotion Association CAS(to J.Y.);the State Key Laboratory of Tree Genetics and Breeding support Program(CAFYBB2019ZY001 to D.P.).
Many important crops(e.g.,tuber,root,and tree crops)are cross-pollinating.For these crops,no inbred lines are available for genetic study and breeding because they are self-incompatible,clonally propagated,or have a l...
关键词：GENOTYPING genetic mapping OUTCROSSING POLYPLOID 
Genome-wide high-resolution mapping of mitotic DNA synthesis sites and common fragile sites by direct sequencing被引量：1
《Cell Research》2020年第11期1009-1023,共15页Fang Ji Hongwei Liao Sheng Pan Liujian Ouyang Fang Jia Zaiyang Fu Fengjiao Zhang Xinwei Geng Xinming Wang Tingting Li Shuangying Liu Madiha Zahra Syeda Haixia Chen Wen Li Zhihua Chen Huahao Shen Songmin Ying 
This work was supported by grants to Songmin Ying from the Ministry of Science and Technology of China(2016YFA0100301);the National Natural Science Foundation of China(81870007,81920108001);the Zhejiang Provincial Natural Science Foundation(LD19H160001);the Zhejiang Provincial Program for the Cultivation of High-Level Innovative Health Talents(2016-63).
Common fragile sites(CFSs)are genomic loci prone to the formation of breaks or gaps on metaphase chromosomes.They are hotspots for chromosome rearrangements and structural variations,which have been extensively implic...
关键词：synthesis RESOLUTION BRIDGING 
Genome-wide association study dissects the genetic bases of salt tolerance in maize seedlings被引量：11
《Journal of Integrative Plant Biology》2019年第6期658-674,共17页Xi Luo Bingcai Wang Shan Gao Fei Zhang William Terzaghi Mingqiu Dai 
supported by the Ministry of Science and Technology of China (2015 BAD02B01)
Excess salinity is a natural stress that causes crop yield losses worldwide. The genetic bases of maize salt tolerance remain largely unknown. Here we investigated the survival rates of 445 maize natural accessions af...
关键词：GENOME-WIDE ASSOCIATION dissects TOLERANCE 
Genome-wide identi?cation of loci affecting seed glucosinolate contents in Brassica napus L.被引量：4
《Journal of Integrative Plant Biology》2019年第5期611-623,共13页Dayong Wei Yixin Cui Jiaqin Mei Lunwen Qian Kun Lu Zhi-Min Wang Jiana Li Qinglin Tang Wei Qian 
supported by the National Natural Science Foundation of China (31601333);the Doctoral Fund Southwest University (SWU118010);the National Program on Key Basic Research Project of China (973 Program: 2015CB150201);the Fundamental Research Funds for the Central Universities (XDJK2017B036)
Glucosinolates are amino acid-derived secondary metabolites that act as chemical defense agents against pests.However,the presence of high levels of glucosinolates severely diminishes the nutritional value of seed mea...
关键词：GLUCOSINOLATES are AMINO defense agents against group-specific HB 
Identification of key genes and pathways for Alzheimer's disease via combined analysis of genome-wide expression profiling in the hippocampus
《Biophysics Reports》2019年第2期98-109,共12页Mengsi Wu Kechi Fang Weixiao Wang Wei Lin Liyuan Guo Jing Wang 
In this study, combined analysis of expression profiling in the hippocampus of 76 patients with Alzheimer's disease (AD) and 40 healthy controls was performed. The effects of covariates (including age, gender, postmor...
关键词：Alzheimer's disease Combined analysis HIPPOCAMPUS Gene expression DIFFERENTIALLY EXPRESSED genes MICROARRAY 
A genome-wide landscape of mRNAs,lncRNAs,and circRNAs during subcutaneous adipogenesis in pigs被引量：8
《Journal of Animal Science and Biotechnology》2019年第1期43-55,共13页Xin Liu Kaiqing Liu Baosen Shan Shengjuan Wei Dongfeng Li Haiyin Han Wei Wei Jie Chen Honglin Liu Lifan Zhang 
supported by the National Transgenic Project of China(2018ZX0800928B);the National Key Technology Research and Development Program of the Ministry of Science and Technology of China(2015BAD03B01);the National Natural Science Foundation of China(31501930)
Background: Preadipocyte differentiation plays a critical role in subcutaneous fat deposition in pigs.However,the roles of different RNAs,such as messenger RNAs(mRNAs),long non-coding RNAs(lncRNAs),and circular RNAs(c...
关键词：CircRNA LncRNA mRNA Pig PREADIPOCYTE differentiation RNA-Seq 
Genome-wide identification and characterization of HSP gene superfamily in whitefly (Bemisia tabacl)and expression profiling analysis under temperature stress被引量：12
《Insect Science》2019年第1期44-57,共14页Xin-Ru Wang Chao Wang Fei-Xue Ban Dan-Tong Zhu Shu-Sheng Liu Xiao-Wei Wang 
the National Natural Science Foundation of China (31390421);the National Basic Research Program of China (2014CB138404).
Heat shock proteins (HSP)are essential molecular chaperones that play important roles in the stress stimulation of insects.Bemisia tabaci,a phloem feeder and invasive species,can cause extensive crop damage through di...
关键词：cold STRESS comparative genomics HSP PHYLOGENETIC thermal STRESS WHITEFLY 
Genome-wide identification of DNA-PKcs-associated RNAs by RIP-Seq
《Signal Transduction and Targeted Therapy》2019年第1期493-495,共3页Zhiquan Song Ying Xie Zongpei Guo Yang Han Hua Guan Xiaodan Liu Teng Ma Ping-kun Zhou 
This work was supported by grants from the National Key Basic Research Program(973 Program)of MOST,China(Grant No.2015CB910601);the National Natural Science Foundation of China(Grant Nos.31370843 and 31500681)to P.K;Zhou and the National Natural Science Foundation,China(Grant Nos.31570853 and 81602799)to T.Ma.
Dear Editor,The DNA-dependent protein kinase catalytic subunit(DNA-PKcs)forms a serine/threonine protein kinase complex with the Ku heterodimer(Ku70/Ku80)and plays an important role in the DNA damage response(DDR)and ...
关键词：GENOME METABOLISM damage 
The genome-wide molecular regulation of mouse gastrulation embryo被引量：2
《Science China(Life Sciences)》2017年第4期363-369,共7页Guangdun Peng Naihe Jing 
supported by the “Strategic Priority Research Program” of the Chinese Academy of Sciences (XDA01010201);National Key Basic Research and Development Program of China (2014CB964804, 2015CB964500);National Natural Science Foundation of China (31430058, 31571513, 31630043, 91519314)
The diverse morphologies among vertebrate species stems from the evolution of a basic body plan that is constituted by a spatially organized ensemble of tissue lineage progenitors. At gastrulation, this body plan is e...
关键词：embryo morphogenetic spatially vertebrate diverse fertilization coordinated streak organized ensemble 
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