RETROTRANSPOSONS

作品数:21被引量:63H指数:6
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相关领域:生物学农业科学更多>>
相关作者:郑先武赵显峰王文明朱立煌邢少辰更多>>
相关机构:中国科学院遗传与发育生物学研究所江苏省农业科学院更多>>
相关期刊:《Science China(Life Sciences)》《Signal Transduction and Targeted Therapy》《American Journal of Molecular Biology》《American Journal of Plant Sciences》更多>>
相关基金:国家自然科学基金上海市青年科技启明星计划国家教育部博士点基金河南省自然科学基金更多>>
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Unveiling the distinctive traits of functional rye centromeres:minisatellites,retrotransposons,and R-loop formation
《Science China(Life Sciences)》2024年第9期1989-2002,共14页Chang Liu Shulan Fu Congyang Yi Yang Liu Yuhong Huang Xianrui Guo Kaibiao Zhang Qian Liu James A.Birchler Fangpu Han 
supported by the National Natural Science Foundation of China(31991212,31920103006)。
Centromeres play a vital role in cellular division by facilitating kinetochore assembly and spindle attachments.Despite their conserved functionality,centromeric DNA sequences exhibit rapid evolution,presenting divers...
关键词:centromere LTR-RTs MINISATELLITE RYE R-loop 
Characterization of genome-wide long terminal repeat retrotransposons provide insights into trait evolution of four grapevine species
《Journal of Systematics and Evolution》2023年第2期414-427,共14页Guang-Qi He Hui-Ying Jin Yi-Zhe Cheng Yi-He Yu Da-Long Guo 
the National Natural Science Foundation of China(NSFC:U1904113);National Key Research and Development Program of China(2018YFD1000105);Program for Innovative Research Team(in Science and Technology)from the University of Henan Province(21IRTSTHN021);Program for Science and Technology Innovation Talents from the Universities of Henan Province(21HASTIT035).
Grapevine is one of the most economically important crops in the world.Although long terminal repeat(LTR)retrotransposons are thought to have played an important role in plants,its distribution in grapevine is not cle...
关键词:evolution GENOME-WIDE GRAPEVINE LTR retrotransposons TRAIT 
Cultivated hawthorn(Crataegus pinnatifida var.major)genome sheds light on the evolution of Maleae(apple tribe)被引量:2
《Journal of Integrative Plant Biology》2022年第8期1487-1501,共15页Ticao Zhang Qin Qiao Xiao Du Xiao Zhang Yali Hou Xin Wei Chao Sun Rengang Zhang Quanzheng Yun MJames CCrabbe Yves Van de Peer Wenxuan Dong 
supported by grants from National Natural Science Foundation of China(32060237 to T.Z.and 32060085 to Q.Q.);funding from the European Research Council(ERC)under the European Union’s Horizon 2020 research and innovation program(No.833522);from Ghent University(Methusalem funding,BOF.MET.2021.0005.01)。
Cultivated hawthorn(Crataegus pinnatifida var.major)is an important medicinal and edible plant with a long history of use for health protection in China.Herein,we provide a de novo chromosomelevel genome sequence of t...
关键词:ancestral chromosome reconstruction hawthorn(Crataegus spp.) long terminal repeat retrotransposons(LTR-RTs) medicinal and edible plants sub-genome 
Renal cell carcinoma and viral infections:A dangerous relationship?
《World Journal of Nephrology》2022年第1期1-12,共12页Melissa Bersanelli Chiara Casartelli Sebastiano Buti Camillo Porta 
Virus-related cancers in humans are widely recognized,but in the case of renal cancer,the link with the world of viruses is not clearly established in humans,despite being known in animal biology.In the present review...
关键词:Renal cell carcinoma Renal cancer Kidney cancer Viruses Viral infections RETROTRANSPOSONS 
Nascent RNA m^(6)A modification at the heart of the gene-retrotransposon conflict被引量:1
《Cell Research》2021年第8期829-831,共3页Victor Billon Gael Cristofari 
Retrotransposons are highly abundant mobile genetic elements in mammalian genomes and can interfere with many genomic processes,particularly the transcription of genes.A study by Xiong et al.reveals that segments of n...
关键词:RETROTRANSPOSONS gene-retrotransposon 
RNA methylation preserves ES cell identity by chromatin silencing of retrotransposons被引量:1
《Signal Transduction and Targeted Therapy》2021年第8期2259-2260,共2页Zhaofa Xu Annabel Ma Yongchao C.Ma 
RNA methylation on N6-methyladenosine(m6A)and histone methylation are critical mechanisms regulating gene expression at epitranscriptomic and epigenetic levels,respectively.However,how RNA methylation modulates histon...
关键词:preserve identity. 
Nuclear m^(6)A reader YTHDC1 regulates the scaffold function of LINE1 RNA in mouse ESCs and early embryos被引量:16
《Protein & Cell》2021年第6期455-474,共20页Chuan Chen Wenqiang Liu Jiayin Guo Yuanyuan Liu Xuelian Liu Jun Liu Xiaoyang Dou Rongrong Le Yixin Huang Chong Li Lingyue Yang Xiaochen Kou Yanhong Zhao You Wu Jiayu Chen Hong Wang Bin Shen Yawei Gao Shaorong Gao 
This work was supported by the National Key R&D Program of China(2016YFA0100400,2020YFA0113200,2018YFA0108900 and 2016YFC1000600);the National Natural Science Foundation of China(31922022,31771646,82022027,31721003,31970796,31871448 and 31871446);the Shanghai Rising-Star Program(19QA1409600);the Shanghai Municipal Medical and Health Discipline Construction Projects(2017ZZ02015);the Fundamental Research Funds for the Central Universities(1515219049 and 22120200410);the Major Program of the Development Fund for Shanghai Zhangjiang National Innovation Demonstration Zone(ZJ2018-ZD-004).
N^(6)-methyladenosine(m^(6)A)on chromosome-associated regulatory RNAs(carRNAs),including repeat RNAs,plays important roles in tuning the chromatin state and transcription,but the intrinsic mechanism remains unclear.He...
关键词:YTHDC1 LINE1-scaffold complex 2-cell RETROTRANSPOSONS H3K9me3 
Retrotransposons in pluripotent stem cells被引量:2
《Cell Regeneration》2020年第1期17-26,共10页Jingwen Wang Junjiu Huang Guang Shi 
This work was supported by the National Key R&D Program of China(2017YFA0102801 and 2017YFC1001901);the National Natural Science Foundation(31671540and 31971365);the Natural Science Foundation of Guangdong Province(2017A030313093 and 2017A030313491);the Guangdong Basic and Applied Basic Research Foundation(2019A1515011422);the Guangzhou Science and Technology Project(201803010020。
Transposable elements constitute about half of the mammalian genome,and can be divided into two classes:the class I(retrotransposons)and the class II(DNA transposons).A few hundred types of retrotransposons,which are ...
关键词:RETROTRANSPOSON Pluripotent stem cells PLURIPOTENCY Epigenetic regulation 
Genome Size Evolution Mediated by Gypsy Retrotransposons in Brassicaceae被引量:1
《Genomics, Proteomics & Bioinformatics》2020年第3期321-332,共12页Shi-Jian Zhang Lei Liu Ruolin Yang Xiangfeng Wang 
the“Innovation Project for the Postdoctoral Researchers”in China;the“Open Research Fund Program”of Beijing Key Lab of Plant Resource Research and Development,Beijing Technology and Business University。
The dynamic activity of transposable elements(TEs)contributes to the vast diversity of genome size and architecture among plants.Here,we examined the genomic distribution and transposition activity of long terminal re...
关键词:Genome Size Evolution Mediated by Gypsy Retrotransposons in Brassicaceae 
Identification and Characterization of Reverse Transcriptase Fragments of Long Interspersed Nuclear Elements (LINEs) in the <i>Morus notabilis</i>Genome被引量:1
《American Journal of Molecular Biology》2017年第3期138-152,共15页Bi Ma Youchao Xin Lulu Kuang Fei Hou Ningjia He 
Reverse transcriptase (rt) fragments from LINE retrotransposons in the mulberry genome were analyzed in terms of heterogeneity, phylogeny, and chromosomal distribution. We amplified and characterized conserved domains...
关键词:iMorus notabilis LINE RETROTRANSPOSONS Reverse Transcriptase CHARACTERIZATION Fluorescence in site Hybridization 
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