CHROMOSOME

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SynDiv:An efficient tool for chromosome collinearity-based population genomics analyses
《Plant Communications》2024年第12期5-8,共4页Ze-Zhen Du Jia-Bao He Wen-Biao Jiao 
National Natural Science Foundation of China(no.32270685);National Natural Science Fund for Excellent Young Scientists Fund Program(Overseas);"Young Scientist Fostering Funds for the National Key Laboratory for Germplasm Innovation&Utilization of Horticultural Crops."
Dear Editor,The advancement of long-read sequencing technologies has significantly enhanced pan-genome studies,enabling numerous chromosome-level de novo assemblies for a single species(Jiao and Schneeberger,2017;Mark...
关键词：TRAITS CALCULATING ALIGNMENT 
Chromosome-scale genome assembly-assisted identification of Brassica napus BnDCPA1 for improvement of plant architecture and yield heterosis被引量：1
《Plant Communications》2024年第7期1-4,共4页Chuanji Zhao Xiaobo Cui Meili Xie Yi Zhang Lingyi Zeng Yueying Liu Junyan Huang Xiong Zhang Chaobo Tong Qiong Hu Lijiang Liu Shengyi Liu 
supported by the National Natural Science Foundation of China(32101813,32370693,and 32300559);the Agricultural Science and Technology Innovation Program of the Chinese Academy of Agricultural Sciences(CAAS-OCRI-XKPY-202104 and CAAS-ZDRW202105);the Young Top-notch Talent Cultivation Program of Hubei Province.
Plant architecture can act as a pivotal determinant of crop yield by maximizing photosynthate accumulation in grains,but no B.napus rapeseed ideotype has yet been defined.However,semi-dwarf and compact(SDC)rapeseed pl...
关键词：ELITE CULTIVAR DWARF 
A chromosome-scale genome assembly of Rauvolfia tetraphylla facilitates identification of the complete ajmaline biosynthetic pathway
《Plant Communications》2024年第4期129-132,共4页Enzo Lezin Ines Carqueijeiro Clement Cuello Mickael Durand Hans JJansen Valentin Verges Caroline Birer Williams Audrey Oudin Thomas Duge de Bernonville Julien Petrignet Noemie Celton Benoit St-Pierre Nicolas Papon Chao Sun Ron P.Dirks Sarah Ellen O’Connor Michael Krogh Jensen Sebastien Besseau Vincent Courdavault 
supported by the EU Horizon 2020 research and innovation program (MIAMi project-grant agreement N°814645);the ARD CVL Biopharmaceutical program of the Region Centre-Val de Loire (ETOPOCentre project);the ANR (project MIACYC–ANR-20-CE43-0010).
Dear Editor,Rauvolfia tetraphylla(aka the Devil pepper)(Supplemental Figure 1)is a well-known medicinal plant that produces monoterpenoid indole alkaloids(MIAs).This MIA biosynthesis occurs in several organs,including...
关键词：properties FIGURE ROOTS 
Haplotype-resolved chromosome-level genome of hexaploid Jerusalem artichoke provides insights into its origin,evolution,and inulin metabolism被引量：1
《Plant Communications》2024年第3期77-92,共16页Sen Wang Anqi Wang Rong Chen Dong Xu Hengchao Wang Fan Jiang Hangwei Liu Wanqiang Qian Wei Fan 
supported by the National Key R&D Program of China (2021YFC2600101);the Shenzhen Science and Technology Program (JCYJ20190814163805604 and KQTD20180411143628272);the Fund of the Key Laboratory of Shenzhen (ZDSYS20141118170111640);the Agricultural Science and Technology Innovation Program.
Jerusalem artichoke(Helianthus tuberosus)is a global multifunctional crop.It has wide applications in the food,health,feed,and biofuel industries and in ecological protection;it also serves as a germplasm pool for bre...
关键词：Helianthus tuberosus hexaploid genome hybridization origin chromosome rearrangement inulin metabolism genes 
A chromosome-level genome assembly of anesthetic drug–producing Anisodus acutangulus provides insights into its evolution and the biosynthesis of tropane alkaloids被引量：2
《Plant Communications》2024年第1期231-244,共14页Wei Zhou Can Wang Xiaolong Hao Fei Chen Qikai Huang Tingyao Liu Jiang Xu Shuai Guo Baosheng Liao Zhixiang Liu Yue Feng Yao Wang Pan Liao Jiayu Xue Min Shi Itay Maoz Guoyin Kai 
supported by the National"Ten-Thousand Talents Program"for Leading Talents of Science and Technology Innovation in China,the National Key R&D Program of China (2018YFC1706203);the National Young Qihuang Scholars Training Program,the National Natural Science Foundation of China (82003888,82073963,81522049,82003889);a Key Scientific and Technological Grant of Zhejiang for Breeding New Agricultural Varieties (2021C02074-3);the"Sannongjiufang"Research Joint Project of Zhejiang Province (2023SNJF029);the Zhejiang Provincial Natural Science Foundation of China (LY20H280008);Research Projects of Zhejiang Chinese Medical University (2021JKZKTS011A,2021JKZDZC06,2020010,and YB20023).
Tropane alkaloids(TAs),which are anticholinergic agents,are an essential class of natural compounds,and there is a growing demand for TAs with anesthetic,analgesic,and spasmolytic effects.Anisodus acutan-gulus(Solanac...
关键词：Anisodus acutangulus tropane alkaloid BIOSYNTHESIS hyoscyamine 6 b-hydroxylase AaWRKY11 
Insights into the evolution and spatial chromosome architecture of jujube from an updated gapless genome assembly被引量：3
《Plant Communications》2023年第6期221-224,共4页Meng Yang Lu Han Shufeng Zhang Li Dai Bin Li Shoukun Han Jin Zhao Ping Liu Zhihui Zhao Mengjun Liu 
supported by the general program of the Natural Science Foundation of Hebei Province,China(C2022204030);the general program of the National Natural Science Foundation of China(32171817);special research projects for the new talent of Hebei Agricultural University,Hebei Province,China(YJ2020025);the China Agricultural Research System(CARS-30-2-07);grants from the Hebei Province Key R&D Program(21326304D).
Dear Editor,Jujube(Ziziphus jujuba Mill.),commonly called Chinese jujube,is a vital member of the Rhamnaceae family.It is famous for its tolerance to dry,barren,and saline-alkali soils,and its fruit has important nutr...
关键词：MILL JUJUBE CULTIVAR 
A chromosome-level genome assembly for Erianthus fulvus provides insights into its biofuel potential and facilitates breeding for improvement of sugarcane被引量：3
《Plant Communications》2023年第4期189-207,共19页Ling Kui Aasim Majeed Xianhong Wang Zijiang Yang Jian Chen Lilian He Yining Di Xuzhen Li Zhenfeng Qian Yinming Jiao Guoyun Wang Lufeng Liu Rong Xu Shujie Gu Qinghui Yang Shuying Chen Hongbo Lou Yu Meng Linyan Xie Fu Xu Qingqing Shen Amit Singh Karl Gruber Yunbing Pan Tingting Hao Yang Dong Fusheng Li 
supported by grants from the Major Science and Technology Projects in Yunnan Province(202202AE090021);a special project of Yunnan Key Laboratory of Crop Production and Smart Agriculture(202105AG070007);a sub-project of the National Key Research and Development Program of China(2018YFD1000503);the National Natural Science Foundation of China(31960451,31560417);a Key Project of Applied Basic Research Program of Yunnan Province(2015FA024);the ESI Discipline Promotion Program of Yunnan Agricultural University(2019YNAUESIMS01).
Erianthus produces substantial biomass,exhibits a good Brix value,and shows wide environmental adaptability,making it a potential biofuel plant.In contrast to closely related sorghum and sugarcane,Erianthus can grow i...
关键词：BIOFUEL cold stress Erianthus fulvus QTLS reference genome SWEET family 
A chromosome-scale genome assembly of Artemisia argyi reveals unbiased subgenome evolution and key contributions of gene duplication to volatile terpenoid diversity被引量：5
《Plant Communications》2023年第3期228-243,共16页Hongyu Chen Miaoxian Guo Shuting Dong Xinling Wu Guobin Zhang Liu He Yuannian Jiao Shilin Chen Li Li Hongmei Luo 
supported by the National Natural Science Foundation of China(81973422 and 31570302);the Chinese Academy of Medical Sciences(CAMS)Innovation Fund for Medical Sciences(2021-I2M-1-071).
Artemisia argyi Le´vl.et Vant.,a perennial Artemisia herb with an intense fragrance,is widely used in traditional medicine in China and many other Asian countries.Here,we present a chromosome-scale genome assembly of...
关键词：Artemisia argyi subgenome evolution gene duplication terpene synthase germacrene synthase nonartemisinin production 
The chromosome-scale genome of Phoebe bournei reveals contrasting fates of terpene synthase (TPS)-a and TPS-b subfamilies被引量：7
《Plant Communications》2022年第6期26-42,共17页Xiao Han Junhong Zhang Shuang Han Sun Li Chong Guanliang Meng Minyan Song Yang Wang Shengcai Zhou Chengcheng Liu Luhuan Lou Xiongzhen Lou Longjun Cheng Erpei Lin Huahong Huang Qi Yang Zaikang Tong 
supported by the Zhejiang Science and Technology Major Program on Agricultural New Variety Breeding(grant 2021C02070-10);the National Natural Science Foundation of China(grants 32171828 and 32101545);the State Key Laboratory of Subtropical Silviculture(grant ZY20180204).
Terpenoids,including aromatic volatile monoterpenoids and sesquiterpenoids,function in defense against pathogens and herbivores.Phoebe trees are remarkable for their scented wood and decay resistance.Unlike other Laur...
关键词：Phoebe bournei genome sequence terpene synthases SESQUITERPENOIDS positive selection pathogen resistance 
Chromosome-level assembly and analysis of the Thymus genome provide insights into glandular secretory trichome formation and monoterpenoid biosynthesis in thyme被引量：1
《Plant Communications》2022年第6期56-73,共18页Meiyu Sun Yanan Zhang Li Zhu Ningning Liu Hongtong Bai Guofeng Sun Jinzheng Zhang Lei Shi 
supported by the Strategic Priority Research Program of the Chinese Academy of Sciences(grant XDA23080603).
Thyme has medicinal and aromatic value because of its potent antimicrobial and antioxidant properties.However,the absence of a fully sequenced thyme genome limits functional genomic studies of Chinese native thymes.Th...
关键词：Thymus quinquecostatus chromosome-level genome phylogenetics glandular secretory trichome monoterpenoids 
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