GENOMIC

作品数：720被引量：1687H指数：16
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Improving the accuracy of genomic prediction in dairy cattle using the biologically annotated neural networks framework
《Journal of Animal Science and Biotechnology》2024年第6期2216-2228,共13页Xue Wang Shaolei Shi Md.Yousuf Ali Khan Zhe Zhang Yi Zhang 
supported by the National Key Research and Development Program of China(2022YFD1302204);the earmarked fund CARS36;Ningxia Key Research and Development Program of China(2023BCF01004;2019NYYZ09)。
Background Biologically annotated neural networks(BANNs)are feedforward Bayesian neural network models that utilize partially connected architectures based on SN P-set annotations.As an interpretable neural network,BA...
关键词：Biologically annotated neural networks Dairy cattle Genomic prediction 
Large‑scale transcriptomic and genomic analyses reveal a novel functional gene SERPINB6 for chicken carcass traits
《Journal of Animal Science and Biotechnology》2024年第4期1466-1481,共16页Di Zhao Ranran Liu Xiaodong Tan Huimin Kang Jie Wang Zheng Ma Haiquan Zhao Hai Xiang Zhengfen Zhang Hua Li Guiping Zhao 
supported by grants from the Key Projects of National Natural Science Foundation of China (No. 32230101);the Project of Qingyuan Science and Technology (2020A01, 2021SJXM011);the Agriculture Research System (CARS-41);the Core Breed Source Research Project JBGS (2021) 107
Background Carcass traits are crucial indicators of meat production efficiency.However,the molecular regulatory mechanisms associated with these traits remain unclear.Results In this study,we conducted comprehensive t...
关键词：Carcass traits CHICKEN Genome SERPINB6 TRANSCRIPTOME 
Significant genomic introgression from grey junglefowl(Gallus sonneratii)to domestic chickens(Gallus gallus domesticus)
《Journal of Animal Science and Biotechnology》2024年第4期1482-1493,共12页Xiurong Zhao Junhui Wen Xinye Zhang Jinxin Zhang Tao Zhu Huie Wang Weifang Yang Guomin Cao Wenjie Xiong Yong Liu Changqing Qu Zhonghua Ning Lujiang Qu 
supported by the earmarked fund for the Beijing Agriculture Innovation Consortium(BAIC06-2023-G01);open project of Xinjiang Production&Construction Corps Key Laboratory of Protection and Utilization of Biological Resources in Tarim Basin(BRZD2104);Fuyang Normal University Provincial and Ministerial Open Platform Fund(FSKFKT026D).
Background Chicken is one of the most numerous and widely distributed species around the world,and many studies support the multiple ancestral origins of domestic chickens.The research regarding the yellow skin phenot...
关键词：BCO2 Domestic chickens Grey junglefowl INTROGRESSION 
Strategies to improve genomic predictions for 35 duck carcass traits in an F2 population被引量：1
《Journal of Animal Science and Biotechnology》2023年第5期1854-1868,共15页Wentao Cai Jian Hu Wenlei Fan Yaxi Xu Jing Tang Ming Xie Yunsheng Zhang Zhanbao Guo Zhengkui Zhou Shuisheng Hou 
supported by grants from the Key Technologies Research on New Breed of Broiler Poultry by Integration of Breeding,Reproduction and Promotion(2021CXGC010805-02);Taishan Industry Leadership Talent Project of Shandong province in China(TSCY20190108);China Agriculture Research System of MOF and MARA(CARS-42);the Science and Technology Innovation Project of the Chinese Academy of Agricultural Sciences(CXGC-IAS-09).
Background Carcass traits are crucial for broiler ducks,but carcass traits can only be measured postmortem.Genomic selection(GS)is an effective approach in animal breeding to improve selection and reduce costs.However...
关键词：Bayesian model Carcass traits DUCK Genome prediction Genomic relationship matrix Mark density 
Improving the accuracy of genomic prediction for meat quality traits using whole genome sequence data in pigs被引量：1
《Journal of Animal Science and Biotechnology》2023年第5期1880-1894,共15页Zhanwei Zhuang Jie Wu Yibin Qiu Donglin Ruan Rongrong Ding Cineng Xu Shenping Zhou Yuling Zhang Yiyi Liu Fucai Ma Jifei Yang Ying Sun Enqin Zheng Ming Yang Gengyuan Cai Jie Yang Zhenfang Wu 
supported by a Technical Innovation of Crossbred in Swine and Breed High Fertility Lines Project(2022B0202090002);a Local Innovative and Research Teams Project of Guangdong Province(2019BT02N630);a Natural Science Foundation of Guangdong Province project(2018B030313011);Innovative Teams of Modern Agriculture and Industry Technology System of Guangdong Province(2022KJ26).
Background Pork quality can directly affect customer purchase tendency and meat quality traits have become valu-able in modern pork production.However,genetic improvement has been slow due to high phenotyping costs.In...
关键词：Genomic prediction Meat quality PIGS Whole genome sequence 
Genetic gain and inbreeding from simulation of different genomic mating schemes for pig improvement被引量：5
《Journal of Animal Science and Biotechnology》2023年第4期1363-1376,共14页Fuping Zhao Pengfei Zhang Xiaoqing Wang Deniz Akdemir Dorian Garrick Jun He Lixian Wang 
funded by the Natural Science Foundations of China(No.32172702);National Key Research and Development Program of China(2021YFD1301101);Agricultural Science and Technology Innovation Program(ASTIP-IAS02)。
Background Genomic selection involves choosing as parents those elite individuals with the higher genomic estimated breeding values(GEBV)to accelerate the speed of genetic improvement in domestic animals.But after mul...
关键词：Genetic gain Genomic mating Genomic selection INBREEDING PIG 
The impact of genotyping strategies and statistical models on accuracy of genomic prediction for survival in pigs被引量：1
《Journal of Animal Science and Biotechnology》2023年第3期908-916,共9页Tianfei Liu Bjarne Nielsen Ole F.Christensen Mogens SandøLund Guosheng Su 
funded by the"Genetic improvement of pig survival"project from Danish Pig Levy Foundation (Aarhus,Denmark);The China Scholarship Council (CSC)for providing scholarship to the first author。
Background:Survival from birth to slaughter is an important economic trait in commercial pig productions.Increasing survival can improve both economic efficiency and animal welfare.The aim of this study is to explore ...
关键词：Genomic prediction Genotyping strategy Simulation Statistical models SURVIVAL 
Fine‑tuning genomic and pedigree inbreeding rates in equine population with a deep and reliable stud book:the case of the Pura Raza Española horse
《Journal of Animal Science and Biotechnology》2023年第2期515-528,共14页Davinia Isabel Perdomo‑Gonzalez Nora Laseca Sebastian Demyda‑Peyras Mercedes Valera Isabel Cervantes Antonio Molina 
funded by the AGL-2017-84217-P Research project from Ministerio de Economia,Industria y Competitividad,Gobierno de Espana.
Background:Estimating inbreeding,which is omnipresent and inevitable in livestock populations,is a primary goal for management and animal breeding especially for those interested in mitigating the negative consequence...
关键词：Genomic inbreeding Horses Pedigree inbreeding 
Advances on genetic and genomic studies of ALV resistance被引量：1
《Journal of Animal Science and Biotechnology》2023年第1期1-14,共14页Guodong Mo Ping Wei Bowen Hu Qinghua Nie Xiquan Zhang 
the National Natural Science Foundation of China(Grant Nos.31970540&31801030);the China Agriculture Research System of MOF and MARA(Grant No.CARS-41);the National Key R&D Program of China(Grant No.2021YFD1300100)。
Avian leukosis(AL)is a general term for a variety of neoplastic diseases in avian caused by avian leukosis virus(ALV).No vaccine or drug is currently available for the disease.Therefore,the disease can result in sever...
关键词：Avian leukosis Endogenous retrovirus Gene editing IMMUNITY Interferon-stimulated genes Receptor Resistant breeding 
Incorporating kernelized multi-omics data improves the accuracy of genomic prediction被引量：1
《Journal of Animal Science and Biotechnology》2023年第1期88-97,共10页Mang Liang Bingxing An Tianpeng Chang Tianyu Deng Lili Du Keanning Li Sheng Cao Yueying Du Lingyang Xu Lupei Zhang Xue Gao Junya Li Huijiang Gao 
funds from the National Natural Science Foundations of China(32172693);the Program of National Beef Cattle and Yak Industrial Technology System(CARS-37)。
Background:Genomic selection(GS)has revolutionized animal and plant breeding after the first implementation via early selection before measuring phenotypes.Besides genome,transcriptome and metabolome information are i...
关键词：BLUP Cosine kernel Genomic prediction TRANSCRIPTOME 
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