PROKARYOTIC

作品数：80被引量：86H指数：5
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相关领域：生物学更多>>
相关作者：于家峰刘焕武寒雪张煜星祝建波更多>>
相关机构：德州学院电子科技大学山东师范大学首都医科大学更多>>
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相关基金：国家自然科学基金国家重点基础研究发展计划俄罗斯基础研究基金安徽省自然科学基金更多>>
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Catalytically active prokaryotic Argonautes employ phospholipase D family proteins to strengthen immunity against different genetic invaders
《mLife》2024年第3期403-416,共14页Feiyue Cheng Aici Wu Zhihua Li Jing Xu Xifeng Cao Haiying Yu Zhenquan Liu Rui Wang Wenyuan Han Hua Xiang Ming Li 
This work was supported by the Science&Technology Fundamental Resources Investigation Program(2022FY101100);the Strategic Priority Research Program of the Chinese Academy of Sciences(Precision seed design and breeding)(XDA24020101);the National Natural Science Foundation of China(Nos.31970544,31970545,32022003,32150020,32200057,and 32270092);the Youth Innovation Promotion Association of CAS(No.2020090);the China National Postdoctoral Program for Innovative Talents(BX20220331);the China Postdoctoral Science Foundation(2022M720160);the Special Research Assistant Program of Chinese Academy of Sciences(No.2023000056).
Prokaryotic Argonautes(pAgos)provide bacteria and archaea with immunity against plasmids and viruses.Catalytically active pAgos utilize short oligonucleotides as guides to directly cleave foreign nucleic acids,while i...
关键词：ARGONAUTE DNA interference genome editing phage defense PLD protein 
Spatiotemporal evolution and assembly processes of ammonia-oxidizing prokaryotic communities in 1 000-year-old coastal reclaimed soils
《Pedosphere》2024年第4期709-725,共17页Sarfraz HUSSAIN Yifan YIN Senlin LIU Shanshan YAN Dongjie CHEN Hui CAO Feng WANG 
financially supported by the Ningbo Science and Technology Bureau,China (Nos.2021S018 and 2022Z169);the National Natural Science Foundation of China (No.42077026)
Coastal marshes are transitional areas between terrestrial and aquatic ecosystems.They are sensitive to climate change and anthropogenic activities.In recent decades,the reclamation of coastal marshes has greatly incr...
关键词：ammonia oxidizer beta nearest taxon index coastal salt marshes community assembly deterministic process nitrification rate stochastic process 
Advancements in prokaryotic systematics and the role of Bergey's International Society for Microbial Systematicsin addressing challenges in the meta-data era被引量：1
《National Science Review》2024年第7期286-298,共13页Jian-Yu Jiao Rashidin Abdugheni Dao-Feng Zhang Iftikhar Ahmed Mukhtiar Ali Maria Chuvochina Svetlana N.Dedysh Xiuzhu Dong Markus Göker Brian P.Hedlund Philip Hugenholtz Kamlesh Jangid Shuang-Jiang Liu Edward R.B.Moore Manik Prabhu Narsing Rao Aharon Oren Ramon Rossello-Mora Bhagwan Narayan Rekadwad Nimaichand Salam Wensheng Shu Iain C.Sutcliffe Wee Fei Aaron Teo Martha E.Trujillo Stephanus N.Venter William B.Whitman Guoping Zhao Wen-Jun Li 
supported by the National Key Research and Development Program of China(2021YFD1500300);the Key-Area Research and Development Program of Guangdong Province(2022B0202110001);the National Natural Science Foundation of China(92251302,32200007 and 32370011);the Guangdong Provincial Science and Technology Plan Project(2022A0505020001);the Xinjiang Uygur Autonomous Region Tianchi Talent Introduction Plan(‘TianChi Excellence Award for Young Doctoral Talents’)and the China Postdoctoral Science Foundation(2023M733725).
Prokaryotes are ubiquitous in the biosphere,important for human health and drive diverse biological and environmental processes.Systematics of prokaryotes,whose origins can be traced to the discovery of microorganisms...
关键词：prokaryotic systematics Bergey's Manual of Systematics of Archaea and Bacteria(BMSAB) Bergey's International Society for Microbial Systematics(BISMiS) meta-data era 
A novel strategy to protect prokaryotic cells from virus infection
《Engineering Microbiology》2024年第2期104-106,共3页Yoshizumi Ishino 
The recent discovery of the CRISPR-Cas-mediated acquired immunity system highlights the fact that our knowl-edge of phage/virus defense mechanisms encoded in bacterial and archaeal genomes is far from complete.Indeed,...
关键词：Prokaryotic immunity Antiviral defense GLYCOSYLASE Modified base Functional screening 
Filamentation and inhibition of prokaryotic CTP synthase with ligands
《mLife》2024年第2期240-250,共11页Chenjun Guo Zixuan Wang Ji‐Long Liu 
supported by the grants from the Ministry of Science and Technology of China(No.2021YFA0804700);National Natural Science Foundation of China(Grant Nos.32370744 and 32350710195);Shanghai Science and Technology Commission(No.20JC1410500);UK Medical Research Council(Grant Nos.MC_UU_12021/3 and MC_U137788471)for grants to J.L.L.
Cytidine triphosphate synthase(CTPS)plays a pivotal role in the de novo synthesis of cytidine triphosphate(CTP),a fundamental building block for RNA and DNA that is essential for life.CTPS is capable of directly bindi...
关键词：CTP synthase Cryo-electron microscopy cytoophidium metabolic filament species specific inhibition 
Global Marine Cold Seep Metagenomes Reveal Diversity of Taxonomy,Metabolic Function,and Natural Products
《Genomics, Proteomics & Bioinformatics》2024年第2期121-134,共14页Tao Yu Yingfeng Luo Xinyu Tan Dahe Zhao Xiaochun Bi Chenji Li Yanning Zheng Hua Xiang Songnian Hu 
support from the Senior User Project of RV KEXUE(Grant No.KEXUE2019GZ05);the Center for Ocean Mega-Science,Chinese Academy of Sciences;funding support from the Second Tibetan Plateau Scientific Expedition and Research Program(Grant No.2021QZKK0100);the National Key R&D Program of China(Grant No.2022YFF1002801);the National Natural Science Foundation of China(Grant No.92251302).
Cold seeps in the deep sea are closely linked to energy exploration as well as global climate change.The alkane-dominated chemical energy-driven model makes cold seeps an oasis of deep-sea life,showcasing an unparalle...
关键词：Global marine cold seep METAGENOME Prokaryotic microbiome Metabolic function Natural product 
Structural Basis of Gabija Bacterial Defense System
《Bulletin of the Chinese Academy of Sciences》2024年第1期53-54,共2页
Prokaryotic organisms have evolved sophisticated immune systems for self-protection to resist bacteriophage invasion.With further research on prokaryotic immune systems,several important molecular biology tools have b...
关键词：PROKARYOTIC INVASION MOLECULAR 
Effects of Biostimulation-Bioaugmentation on Coastal Microbial Community in an in situ Mesocosm System被引量：1
《Journal of Ocean University of China》2024年第1期233-246,共14页YUAN Fangzheng ZHAO Yangyong DAI Yulai YANG Wen ZHU Jinyong 
supported by the National Natural Science Foundation of China(No.42077219);the Ningbo Municipal Natural Science Foundation(No.2019A610443);the Hangzhou Municipal Agriculture and Social Development Project(No.2020ZDSJ0697);the Fundamental Research Funds for the Provincial Universities of Zhejiang(No.SJLY2020011)
Globally,various types of pollution affect coastal waters as a result of human activities.Bioaugmentation and biostimulation are effective methods for treating water pollution.However,few studies have explored the res...
关键词：prokaryotic community eukaryotic community BIOAUGMENTATION BIOSTIMULATION coastal waters 
Characterization of argonaute nucleases from mesophilic bacteria Pseudobutyrivibrio ruminis
《Bioresources and Bioprocessing》2024年第1期1244-1256,共13页Xiaoyi Xu Hao Yang Huarong Dong Xiao Li Qian Liu Yan Feng 
supported by the Ministry of Science and Technology(2020YFA0907700);National Natural Science Foundation of China(31770078,32270051);Shanghai Pilot Program for Basic Research-Shanghai Jiao Tong University(21TQ1400204).
Mesophilic Argonautes(Agos)from microbial resources have received significant attention due to their potential applications in genome editing and molecular diagnostics.This study characterizes a novel Ago from Pseudob...
关键词：Pseudobutyrivibrio ruminis Argonaute Mesophilic Argonaute Prokaryotic Argonaute ENDONUCLEASE DNA cleavage 
Cryo-EM structures of a prokaryotic heme transporter CydDC
《Protein & Cell》2023年第12期919-923,共5页Chen Zhu Yanfeng Shi Jing Yu Wenhao Zhao Lingqiao Li Jingxi Liang Xiaolin Yang Bing Zhang Yao Zhao Yan Gao Xiaobo Chen Xiuna Yang Lu Zhang Luke W.Guddat Lei Liu Haitao Yang Zihe Rao Jun Li 
supported by grants from National Key R&D Program of China(Grant No.2021YFA1300900 to JL:2022YFC2302900 to HY);the Lingang Laboratory(Grant No LG202101-01-08);Shanghai Municipal Commission of Science and Technology(Grant No.22ZR1441600 to JL,ZD2021CY001 to HY)and the Shanghai Frontiers Science Center for Biomacromolecules and Precision Medicine,ShanghaiTech University.
DearEditor,Heme is an essential cofactor required across all kingdoms of life utilized in numerous biological processes,including cellular respiration.CydDC is a prokaryotic ATP-binding cassette(ABC)transporter requir...
关键词：utilized DISULFIDE Poole 
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