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Identification of new cotton fiber-quality QTL by multiple genomic analyses and development of markers for genomic breeding
《The Crop Journal》2024年第3期866-879,共14页Haozhe Tan Binghui Tang Mengling Sun Qiulu Yin Yizan Ma Jianying Li Pengcheng Wang Zhonghua Li Guannan Zhao Maojun Wang Xianlong Zhang Chunyuan You Lili Tu 
supported by National Key Research and Development Program of China(2022YFF1001400);the National Natural Science Foundation of China(31830062 and 32172071);Innovation and Application of Superior Crop Germplasm Resources of Shihezi(2021NY01);Breeding of New Cotton Varieties and Application of Transgenic Breeding Technology(2022NY01)。
Cotton fiber is one of the main raw materials for the textile industry.In recent years,many cotton fiber quality QTL have been identified,but few were applied in breeding.In this study,a genome wide association study(...
关键词：Cotton fiber quality breeding GWAS Genome-wide selective sweep analysis Genomic selection InDel markers 
Haplotype variation and KASP markers for SiPSY1-A key gene controlling yellow kernel pigmentation in foxtail millet被引量：2
《The Crop Journal》2023年第6期1902-1911,共10页Rongjun Zuo Yanyan Zhang Yanbing Yang Chunfang Wang Hui Zhi Linlin Zhang Sha Tang Yanan Guan Shunguo Li Ruhong Cheng Zhonglin Shang Guanqing Jia Xianmin Diao 
the National Natural Science Foundation of China(U21A20216);the National Key Research and Development Program of China(2018YFD1000705/2018YFD1000700);Fundamental Research Funds of the Chinese Academy of Agricultural Sciences(Grant to Guanqing Jia,1610092016116,Y2017JC15);China Agricultural Research System(CARS06-14.5-A04);State Key Laboratory of Crop Gene Resources and Breeding,Key Laboratory of Grain Crop Genetic Resources Evaluation and Utilization,Key Laboratory of Crop Gene Resource and Germplasm Enhancement(MOA),and Technology Innovation Program of the Chinese Academy of Agricultural Sciences.
Carotenoid biosynthesis and accumulation are important in determining nutritional and commercial value of crop products.Yellow pigmentation of mature kernels caused by carotenoids is considered a vital quality trait i...
关键词：Carotenoids LUTEIN ZEAXANTHIN Marker assisted selection Setaria italica 
Identification of KASP markers and putative genes for pre-harvest sprouting resistance in common wheat(Triticum aestivum L.)被引量：2
《The Crop Journal》2023年第2期549-557,共9页Guannan Liu Daniel Mullan Aimin Zhang Hui Liu Dongcheng Liu Guijun Yan 
funded by Global Innovation Linkage program (GIL53853) from Australian Department of Industry, Science, Energy and Resources;Australian Government RTP Scholarship (International);University Postgraduate Awards (UPA)
Common wheat(Triticum aestivum L.)is the most important crop in the world and a typical allopolyploid with a large and complex genome.Pre-harvest sprouting(PHS)leads to a significant reduction in grain quality worldwi...
关键词：Pre-harvest sprouting(PHS) KASP marker Functional genes Chromosome 3AL 90K SNP assay Near-isogenic lines 
Genome-wide markers for seed yield and disease resistance in perennial ryegrass
《The Crop Journal》2022年第2期508-514,共7页Kristina Jaškune Vilma Kemešyte Andrius Aleliūnas Grazina Statkeviciute 
the framework of the long-term research program"Genetic determination of the traits of agricultural and forest plants,development of modern cultivars"and"Genome-wide functional analysis of perennial ryegrass for improved growth under water limiting conditions(Grow Gene)"project funded by the Research Council of Lithuania(S-MIP-17-24)。
The market success of perennial ryegrass(Lolium perenne L.) cultivars depends on sufficient seed production, as they are propagated by seed. However, breeding for high quality forage production reduces seed yield, and...
关键词：Crown rust Puccinia coronata f.sp.lolli Flag-leaf length Genome-wide association study(GWAS) Seed yield Lolium perenne L. 
RNA-Seq analysis and development of SSR and KASP markers in lentil(Lens culinaris Medikus subsp. culinaris)被引量：1
《The Crop Journal》2020年第6期953-965,共13页Dong Wang Tao Yang Rong Liu Nana Li Xiaomu Wang Ashutosh Sarker Xiaodong Zhang Runfang Li Yanyan Pu Guan Li Yuning Huang Yishan Ji Zhaojun Li Qian Tian Xuxiao Zong Hanfeng Ding 
supported by the funding of Subject Team of Science and Technology Innovation Project of Shandong Academy of Agricultural Sciences(CXGC2018E15);National Key Research and Development Program of China(2017YFE0105100);Industry Team of Science and Technology Innovation Project of Shandong Academy of Agricultural Sciences(CXGC2016A02);Crop Germplasm Resources Protection(2130135);Coarse Cereals Innovation Team of Modern Agricultural Industry Technology System of Shandong Province(SDAIT-15-01);China Agriculture Research System(CARS-08);Youth Research Fund of Shandong Academy of Agricultural Sciences(2016YQN19);Agricultural Science and Technology Innovation Program(ASTIP)of CAAS。
Lentil(Lens culinaris Medikus subsp.culinaris,2 n=14)is a cool-season legume with high production potential for multiple uses.However,limited molecular research has been conducted in this species owing to its large ge...
关键词：LENTIL RNA-SEQ EST-SSR KASP Genetic diversity 
Ordering of high-density markers by the k-Optimal algorithm for the traveling-salesman problem被引量：6
《The Crop Journal》2020年第5期701-712,共12页Luyan Zhang Huihui Li Lei Meng Jiankang Wang 
This work was supported by the National Natural Science Foundation of China(31861143003);HarvestPlus(part of the CGIAR Research Program on Agriculture for Nutrition and Health,http://www.harvestplus.org/).
Construction of accurate and high-density linkage maps is a key research area of genetics.We investigated the efficiency of genetic map construction(MAP)using modifications of the k-Optimal(k-Opt)algorithm for solving...
关键词：OPTIMAL algorithm TRAVELING 
Variation in allelic frequencies at loci associated with kernel weight and their effects on kernel weight-related traits in winter wheat被引量：2
《The Crop Journal》2019年第1期30-37,共8页Teng Li Hongwei Liu Chunyan Mai Guangjun Yu Huili Li Lingzhi Meng Dawei Jian Li Yang Yang Zhou Hongjun Zhang Hongjie Li 
supported by the National Key Research and Development Program of China (2017YFD0101000, 2016YFD0101004);the National Natural Science Foundation of China (31771881, 31401468);the CAAS Innovation Team and the National Engineering Laboratory of Crop Molecular Breeding
Knowledge of allelic frequencies at loci associated with kernel weight and effects on kernel weight-related traits is crucial for yield improvement in wheat. Kernel weight-related traits were evaluated in 200 Chinese ...
关键词：Allelic frequency Allelic VARIATION Functional MARKERS TRITICUM AESTIVUM 
Development and validation of InDel markers for identification of QTL underlying flowering time in soybean被引量：1
《The Crop Journal》2018年第2期126-135,共10页Jialin Wang Lingping Kong Kanchao Yu Fengge Zhang Xinyi Shi Yanping Wang Haiyang Nan Xiaohui Zhao Sijia Lu Dong Cao Xiaoming Li Chao Fang Feifei Wang Tong Su Shichen Li Xiaohui Yuan Baohui Liu Fanjiang Kong 
supported by National Natural Science Foundation of China (31430065, 31571686, 31371643, 31071445);National Key Research and Development Program (2016YFD0100401);“Strategic Priority Research Program” of the Chinese Academy of Sciences (XDA08030108);the Open Foundation of the Key Laboratory of Soybean Molecular Design Breeding of Chinese Academy of Sciences;“One-hundred Talents” Startup Funds from Chinese Academy of Sciences;Scientific Research Foundation for Returned Chinese Scholars of Heilongjiang Province, China (LC201417);the Science Foundation for Creative Research Talents of Harbin Science and Technology Bureau, China (2014RFQYJ046)
Soybean [Glycine max(L.) Merrill] is a major plant source of protein and oil. An accurate and well-saturated molecular linkage map is a prerequisite for forward genetic studies of gene function and for modern breeding...
关键词：SOYBEAN RESEQUENCING data INDEL MARKERS Genetic map QTL analysis 
Development and validation of simple sequence repeat markers from Arachis hypogaea transcript sequences
《The Crop Journal》2018年第2期172-180,共9页Houmiao Wang Yong Lei Liying Yan Liyun Wan Yan Cai Zefeng Yang Jianwei Lv Xiaojie Zhang Chenwu Xu Boshou Liao 
funded by the National Basic Research Program of China (2013CB127803, 2011CB109304);National High Technology Research and Development Program of China (2013AA102602);National Natural Science Foundation of China (31371662, 31461143022);China Agriculture Research System (CARS-14);Shandong Agricultural Industrialization Project for New Variety Development (2014–2016)
Simple sequence repeats(SSRs) are important molecular markers for assessing genetic diversity in Arachis hypogaea L. and many other crops and constructing genetic linkage maps for important agricultural traits. In thi...
关键词：ARACHIS HYPOGAEA L Molecular MARKER POLYMORPHISM SSR 
Genetic diversity assessment of a set of introduced mung bean accessions(Vigna radiata L.)被引量：3
《The Crop Journal》2018年第2期207-213,共7页Lixia Wang Peng Bai Xingxing Yuan Honglin Chen Suhua Wang Xin Chen Xuzhen Cheng 
supported by the China Agriculture Research System (CARS-09);the Agricultural Science and Technology Innovation Program (ASTIP) of CAAS;the National Key Technology R&D Program of China (2013BAD01B03-18)
Genetic resources from other countries or regions play an important role in broadening the genetic background of local breeding varieties. Here we describe observations on the adaptability of mung bean germplasm obtai...
关键词：Vigna RADIATA Plant introduction SSR MARKERS GENETIC diversity 
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